Factsheet for HORVU2Hr1G094470.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G395900.1	Wheat	nucleus	83.0	91.7
HORVU2Hr1G094460.2	Barley	mitochondrion, plasma membrane	81.03	91.52
TraesCS2B01G416300.1	Wheat	nucleus	81.03	90.31
TraesCS2A01G398300.2	Wheat	nucleus	80.24	90.22
Os04t0574500-01	Rice	cytosol, mitochondrion, nucleus, plastid	65.22	69.92
Zm00001d051456_P001	Maize	nucleus	60.08	68.78
GSMUA_Achr5P20170_001	Banana	extracellular	40.71	60.23
HORVU6Hr1G065740.4	Barley	nucleus	47.83	56.81
GSMUA_Achr8P12060_001	Banana	extracellular	41.9	52.48
GSMUA_Achr11P...	Banana	mitochondrion, plasma membrane	39.13	48.29
VIT_02s0025g04910.t01	Wine grape	nucleus	29.25	35.41
PGSC0003DMT400009997	Potato	nucleus	14.23	29.51
Solyc08g079800.2.1	Tomato	nucleus	22.53	26.15
HORVU2Hr1G054270.3	Barley	plastid	26.09	22.0
HORVU7Hr1G034610.4	Barley	mitochondrion	23.32	18.85
HORVU4Hr1G037480.5	Barley	nucleus	24.11	18.6
HORVU0Hr1G016590.2	Barley	cytosol, nucleus	14.62	17.45
HORVU7Hr1G008680.11	Barley	cytosol, mitochondrion, nucleus, vacuole	26.48	16.79
HORVU6Hr1G068370.1	Barley	nucleus	25.3	16.41
HORVU4Hr1G003440.12	Barley	nucleus	24.9	15.44
HORVU6Hr1G035720.1	Barley	cytosol, mitochondrion, nucleus	18.58	14.97
HORVU6Hr1G081210.1	Barley	nucleus	24.11	14.77
HORVU0Hr1G016610.1	Barley	plastid	24.11	14.63
HORVU4Hr1G010080.2	Barley	nucleus	28.85	11.99
HORVU0Hr1G026650.1	Barley	mitochondrion, nucleus	5.14	11.4

Protein Annotations

MapMan:15.5.52.1	UniProt:A0A287J054	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0032502
InterPro:GRF	InterPro:Gln-Leu-Gln_QLQ	EnsemblPlantsGene:HORVU2Hr1G094470	EnsemblPlants:HORVU2Hr1G094470.2	InterPro:IPR014977	InterPro:IPR014978
PFAM:PF08879	PFAM:PF08880	PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF3
SMART:SM00951	UniParc:UPI000B469B41	InterPro:WRC_dom	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:-:664890347..664891461

Molecular Weight (calculated)

26997.7 Da

IEP (calculated)

8.613

GRAVY (calculated)

-0.595

Length

253 amino acids

Sequence
(BLAST)

001: SVQTQKQHAP DTQTATGEGH TPEMTERRQE EHSPPSKLPR LSGADDDADA DANDGVGTVT MAAPLPLALG LGLGVGGCCS DSRRSDAEAT RPSALTFMQR
101: QELEHQVLIY RYFAANAPVP VHLVLPIWKS LAASSSAPQR FPSLAGLGSM CYDQRSSMEP EPDRCRRTDG KKWRCSHGVV PGHKYCERHV HRGRGRSRKP
201: VEAAAATSAT PIRAMHAADG QGATGAHAHA PPQRLSFSSP AGVYLAHGTA RAT

Best Arabidopsis Sequence Match ( AT2G36400.1 )
(BLAST)

001: MDLQLKQWRS QQQQQHQTES EEQPSAAKIP KHVFDQIHSH TATSTALPLF TPEPTSSKLS SLSPDSSSRF PKMGSFFSWA QWQELELQAL IYRYMLAGAA
101: VPQELLLPIK KSLLHLSPSY FLHHPLQHLP HYQPAWYLGR AAMDPEPGRC RRTDGKKWRC SRDVFAGHKY CERHMHRGRN RSRKPVETPT TVNATATSMA
201: SSVAAAATTT TATTTSTFAF GGGGGSEEVV GQGGSFFFSG SSNSSSELLH LSQSCSEMKQ ESNNMNNKRP YESHIGFSNN RSDGGHILRP FFDDWPRSSL
301: QEADNSSSPM SSATCLSISM PGNSSSDVSL KLSTGNEEGA RSNNNGRDQQ NMSWWSGGGS NHHHHNMGGP LAEALRSSSS SSPTSVLHQL GVSTQAFH

Arabidopsis Description

GRF3Growth-regulating factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJR5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.