Factsheet for GSMUA_Achr5P20170_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	mitochondrion, plasma membrane	80.7	67.32
GSMUA_Achr8P12060_001	Banana	extracellular	76.61	64.85
Zm00001d051456_P001	Maize	nucleus	67.25	52.04
Os02t0678800-01	Rice	nucleus	63.74	51.66
TraesCS6B01G267500.1	Wheat	nucleus	62.57	50.71
TraesCS6A01G257600.1	Wheat	nucleus	61.99	50.0
TraesCS6D01G238900.1	Wheat	nucleus	61.4	48.84
Os04t0574500-01	Rice	cytosol, mitochondrion, nucleus, plastid	65.5	47.46
HORVU6Hr1G065740.4	Barley	nucleus	58.48	46.95
TraesCS2A01G398300.2	Wheat	nucleus	60.82	46.22
HORVU2Hr1G094460.2	Barley	mitochondrion, plasma membrane	60.23	45.98
TraesCS2D01G395900.1	Wheat	nucleus	60.82	45.41
TraesCS2B01G416300.1	Wheat	nucleus	59.65	44.93
HORVU2Hr1G094470.2	Barley	nucleus	60.23	40.71
VIT_02s0025g04910.t01	Wine grape	nucleus	49.12	40.19
GSMUA_Achr4P32310_001	Banana	nucleus	29.82	35.17
PGSC0003DMT400009997	Potato	nucleus	21.64	30.33
Solyc08g079800.2.1	Tomato	nucleus	33.33	26.15
GSMUA_Achr10P...	Banana	nucleus	43.27	21.96
GSMUA_Achr8P30640_001	Banana	nucleus	38.6	20.62
GSMUA_Achr1P23840_001	Banana	nucleus	42.69	20.33
GSMUA_AchrUn_...	Banana	nucleus	37.43	18.77
GSMUA_Achr3P22790_001	Banana	nucleus	42.69	18.62
GSMUA_Achr6P01270_001	Banana	nucleus	36.26	18.45
GSMUA_Achr8P07650_001	Banana	extracellular	33.92	18.35
GSMUA_Achr2P04650_001	Banana	extracellular	43.86	17.4
GSMUA_AchrUn_...	Banana	nucleus	41.52	17.27
GSMUA_Achr7P02330_001	Banana	nucleus	34.5	17.15
GSMUA_Achr1P21940_001	Banana	nucleus	38.01	17.15
GSMUA_Achr1P27000_001	Banana	nucleus	37.43	15.09
GSMUA_Achr3P15140_001	Banana	nucleus	36.84	12.91
GSMUA_Achr7P27480_001	Banana	nucleus	40.35	11.37
GSMUA_Achr8P04970_001	Banana	nucleus	38.01	11.19
GSMUA_Achr8P26530_001	Banana	nucleus	38.6	4.6

Protein Annotations

MapMan:15.5.52.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0032502	InterPro:GRF
EnsemblPlantsGene:GSMUA_Achr5G20170_001	EnsemblPlants:GSMUA_Achr5P20170_001	EnsemblPlants:GSMUA_Achr5T20170_001	InterPro:Gln-Leu-Gln_QLQ	InterPro:IPR014977	InterPro:IPR014978
UniProt:M0T046	PFAM:PF08879	PFAM:PF08880	PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602
PANTHER:PTHR31602:SF3	SMART:SM00951	UniParc:UPI0002957791	InterPro:WRC_dom	SEG:seg	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G20170_001]

Coordinates

chr5:+:21912372..21912980

Molecular Weight (calculated)

18448.4 Da

IEP (calculated)

9.859

GRAVY (calculated)

-0.292

Length

171 amino acids

Sequence
(BLAST)

001: MAAPSPLMLG LGLGLGTGPG ASKPVITFMQ LQELEHQALI YKYMAAGLPV PVHLVLPIWK SVAASSFGAY HYPSLMGYGS LCLDYRNSME PEPGRCRRTD
101: GKKWRCSRDV VPDQKYCERH MHRGRNRSRK PVEAAATSAA AASTPPSCPS RSRLVGGFCR PPTPPAAAAE P

Best Arabidopsis Sequence Match ( AT4G37740.1 )
(BLAST)

001: MDIGVHVLGS VTSNENESLG LKELIGTKQD RSGFIGEDCL QRSLKLARTT TRAEEEENLS SSVAAAYCKT MSFHQGIPLM RSASPLSSDS RRQEQMLSFS
101: DKPDALDFSK YVGLDNSSNN KNSLSPFLHQ IPPPSYFRSS GGYGSGGMMM NMSMQGNFTG VKGPFTLTQW AELEQQALIY KYITANVPVP SSLLISIKKS
201: FYPYGSLPPS SFGWGTFHLG FAGGNMDPEP GRCRRTDGKK WRCSRDAVPD QKYCERHINR GRHRSRKPVE VQSGQNQTAA AASKAVTTPQ QPVVAGNTNR
301: SNARASSNRS LAIGSQYINP STESLPNNRG VSIYPSTVNL QPKESPVIHQ KHRNNNNPFE FGHISSDSLL NPNTAKTYGS SFLDFSSNQE KHSGNHNHNS
401: WPEELTSDWT QLSMSIPIAS SSPSSTHNNN NAQEKTTLSP LRLSRELDLS IQTDETTIEP TVKKVNTWIP ISWGNSLGGP LGEVLNSTTN SPTFGSSPTG
501: VLQKSTFCSL SNNSSVSSPI AENNRHNGDY FHYTT

Arabidopsis Description

GRF2GRF2 [Source:UniProtKB/TrEMBL;Acc:A0A178UXW8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.