Factsheet for GSMUA_AchrUn_randomP04320_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P23840_001	Banana	nucleus	72.75	83.29
GSMUA_Achr10P...	Banana	nucleus	57.18	69.73
VIT_16s0039g01450.t01	Wine grape	nucleus	48.66	62.89
GSMUA_Achr2P04650_001	Banana	extracellular	61.56	58.7
KRH27682	Soybean	nucleus	40.88	54.55
KRH77798	Soybean	nucleus	40.88	52.83
KRH23984	Soybean	nucleus	41.61	51.35
GSMUA_Achr6P01270_001	Banana	nucleus	41.36	50.6
KRH29333	Soybean	nucleus	41.85	50.44
Solyc12g096070.1.1	Tomato	nucleus	41.61	49.57
PGSC0003DMT400075563	Potato	nucleus	41.61	48.86
PGSC0003DMT400079338	Potato	nucleus	37.71	48.74
PGSC0003DMT400047580	Potato	nucleus	40.63	47.31
Solyc08g075950.1.1	Tomato	nucleus	41.36	47.09
Solyc08g005430.2.1	Tomato	nucleus	39.9	46.07
GSMUA_Achr5P20170_001	Banana	extracellular	17.27	41.52
GSMUA_Achr8P12060_001	Banana	extracellular	18.0	36.63
GSMUA_Achr11P...	Banana	mitochondrion, plasma membrane	18.0	36.1
GSMUA_Achr4P32310_001	Banana	nucleus	12.41	35.17
GSMUA_Achr8P30640_001	Banana	nucleus	27.01	34.69
GSMUA_Achr1P21940_001	Banana	nucleus	27.74	30.08
GSMUA_Achr7P02330_001	Banana	nucleus	24.57	29.36
GSMUA_Achr8P07650_001	Banana	extracellular	19.71	25.63
GSMUA_Achr3P22790_001	Banana	nucleus	24.09	25.26
GSMUA_Achr1P27000_001	Banana	nucleus	22.87	22.17
GSMUA_AchrUn_...	Banana	nucleus	16.55	19.94
GSMUA_Achr8P04970_001	Banana	nucleus	26.28	18.59
GSMUA_Achr7P27480_001	Banana	nucleus	26.76	18.12
GSMUA_Achr3P15140_001	Banana	nucleus	20.92	17.62
GSMUA_Achr8P26530_001	Banana	nucleus	26.03	7.46

Protein Annotations

MapMan:15.5.52.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0032502	InterPro:GRF
EnsemblPlantsGene:GSMUA_AchrUn_randomG04320_001	EnsemblPlants:GSMUA_AchrUn_randomP04320_001	EnsemblPlants:GSMUA_AchrUn_randomT04320_001	InterPro:Gln-Leu-Gln_QLQ	InterPro:IPR014977	InterPro:IPR014978
UniProt:M0U694	PFAM:PF08879	PFAM:PF08880	PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602
PANTHER:PTHR31602:SF8	SMART:SM00951	UniParc:UPI000295E4C3	InterPro:WRC_dom	SEG:seg	:

Description

growth-regulating factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG04320_001]

Coordinates

chrchrUn_random:-:18041368..18045187

Molecular Weight (calculated)

45471.2 Da

IEP (calculated)

9.287

GRAVY (calculated)

-0.508

Length

411 amino acids

Sequence
(BLAST)

001: MNSFAAVVGG RPPFTATQWQ ELEHQALILK YLMAGVPVPP ELIIPIRRSF ETLPGRYYHP SQPLGIMSYY SYYGKKPDPE PGRCRRTDGK KWRCSKDAYP
101: GSKYCERHMH RGRNRSRKPV ESQTVAPSQT SSSVLTSLSP SASNASGTGV GSFRGITLQP ITGPSNAQSL CFGGASSSQL PMDTGTFGNS LYCLQRKRLI
201: AFIFFLHISE IALFSVLANC NAPCTWETNQ SVKYPRSIDG RSMRSWISWY FSGLKPDADE HSFFSGASGT ARALGVDSSL DSSWRPMPPP VSSFSLSKTH
301: DLSILQNAYP QLQSVQDLGQ VTINSLSRQQ QQHHSFFGSE FGSSEPVKHE TQLLRPFFDE WPKTRDSWSD LEEDRSNRTS FSTTQLSISI PIASSDFSST
401: SSRSPNGGSP S

Best Arabidopsis Sequence Match ( AT3G13960.1 )
(BLAST)

001: MMSLSGSSGR TIGRPPFTPT QWEELEHQAL IYKYMVSGVP VPPELIFSIR RSLDTSLVSR LLPHQSLGWG CYQMGFGRKP DPEPGRCRRT DGKKWRCSRE
101: AYPDSKYCEK HMHRGRNRAR KSLDQNQTTT TPLTSPSLSF TNNNNPSPTL SSSSSSNSSS TTYSASSSSM DAYSNSNRFG LGGSSSNTRG YFNSHSLDYP
201: YPSTSPKQQQ QTLHHASALS LHQNTNSTSQ FNVLASATDH KDFRYFQGIG ERVGGVGERT FFPEASRSFQ DSPYHHHQQP LATVMNDPYH HCSTDHNKID
301: HHHTYSSSSS SQHLHHDHDH RQQQCFVLGA DMFNKPTRSV LANSSRQDQN QEEDEKDSSE SSKKSLHHFF GEDWAQNKNS SDSWLDLSSH SRLDTGS

Arabidopsis Description

GRF5Growth-regulating factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8A6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.