Factsheet for GSMUA_Achr10P06370_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P23840_001	Banana	nucleus	69.73	65.46
VIT_16s0039g01450.t01	Wine grape	nucleus	59.35	62.89
GSMUA_Achr2P04650_001	Banana	extracellular	78.93	61.72
GSMUA_AchrUn_...	Banana	nucleus	69.73	57.18
KRH27682	Soybean	nucleus	49.85	54.55
PGSC0003DMT400079338	Potato	nucleus	49.85	52.83
KRH77798	Soybean	nucleus	49.26	52.2
KRH23984	Soybean	nucleus	51.04	51.65
Solyc12g096070.1.1	Tomato	nucleus	51.93	50.72
PGSC0003DMT400047580	Potato	nucleus	53.12	50.71
KRH29333	Soybean	nucleus	51.04	50.44
Solyc08g075950.1.1	Tomato	nucleus	53.71	50.14
PGSC0003DMT400075563	Potato	nucleus	51.93	50.0
Solyc08g005430.2.1	Tomato	nucleus	52.23	49.44
GSMUA_Achr6P01270_001	Banana	nucleus	48.37	48.51
GSMUA_Achr5P20170_001	Banana	extracellular	21.96	43.27
GSMUA_Achr11P...	Banana	mitochondrion, plasma membrane	22.85	37.56
GSMUA_Achr8P12060_001	Banana	extracellular	21.66	36.14
GSMUA_Achr4P32310_001	Banana	nucleus	15.43	35.86
GSMUA_Achr8P30640_001	Banana	nucleus	31.75	33.44
GSMUA_Achr7P02330_001	Banana	nucleus	31.16	30.52
GSMUA_Achr1P21940_001	Banana	nucleus	33.83	30.08
GSMUA_Achr8P07650_001	Banana	extracellular	23.44	25.0
GSMUA_Achr3P22790_001	Banana	nucleus	28.19	24.23
GSMUA_Achr1P27000_001	Banana	nucleus	27.6	21.93
GSMUA_AchrUn_...	Banana	nucleus	19.88	19.65
GSMUA_Achr8P04970_001	Banana	nucleus	31.45	18.24
GSMUA_Achr3P15140_001	Banana	nucleus	25.22	17.42
GSMUA_Achr7P27480_001	Banana	nucleus	30.86	17.13
GSMUA_Achr8P26530_001	Banana	nucleus	31.45	7.39

Protein Annotations

MapMan:15.5.52.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0032502	InterPro:GRF
EnsemblPlantsGene:GSMUA_Achr10G06370_001	EnsemblPlants:GSMUA_Achr10P06370_001	EnsemblPlants:GSMUA_Achr10T06370_001	InterPro:Gln-Leu-Gln_QLQ	InterPro:IPR014977	InterPro:IPR014978
UniProt:M0RFW4	PFAM:PF08879	PFAM:PF08880	PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602
PANTHER:PTHR31602:SF8	SMART:SM00951	UniParc:UPI0002961D55	InterPro:WRC_dom	SEG:seg	:

Description

growth-regulating factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G06370_001]

Coordinates

chr10:+:16750167..16754056

Molecular Weight (calculated)

36919.8 Da

IEP (calculated)

8.829

GRAVY (calculated)

-0.753

Length

337 amino acids

Sequence
(BLAST)

001: MGGRAPFTAA QWQELEHQAL IYKYLMAGVP VPPELVIPIQ RSFEALAGRY YHHPALAYCS YYGKKLDPEP GRCRRTDGKK WRCSKDAHPD SKYCERHMHR
101: GRNRSRKPVE SQSASQMQSS SSTVTSIAPA GSGGGGNGGG SFQSIPQLSV AGHSNTQQSL CLGTSSSSQL PLGPGPFGNR YFCGVKPGAD EHNFFSETSG
201: STRHLGMDSI DGSWRLMPSQ VSSFPPSEAR GPSLLQSACP PPQSVQDLGQ VSFSSISKQQ QQHSFVGSKF DSPQPAKHES QFLRPFFDEW PKTRDSWSDL
301: EEDRSNRASY STTQLSISFP MASSDFSTSS SRSPKHD

Best Arabidopsis Sequence Match ( AT3G13960.1 )
(BLAST)

001: MMSLSGSSGR TIGRPPFTPT QWEELEHQAL IYKYMVSGVP VPPELIFSIR RSLDTSLVSR LLPHQSLGWG CYQMGFGRKP DPEPGRCRRT DGKKWRCSRE
101: AYPDSKYCEK HMHRGRNRAR KSLDQNQTTT TPLTSPSLSF TNNNNPSPTL SSSSSSNSSS TTYSASSSSM DAYSNSNRFG LGGSSSNTRG YFNSHSLDYP
201: YPSTSPKQQQ QTLHHASALS LHQNTNSTSQ FNVLASATDH KDFRYFQGIG ERVGGVGERT FFPEASRSFQ DSPYHHHQQP LATVMNDPYH HCSTDHNKID
301: HHHTYSSSSS SQHLHHDHDH RQQQCFVLGA DMFNKPTRSV LANSSRQDQN QEEDEKDSSE SSKKSLHHFF GEDWAQNKNS SDSWLDLSSH SRLDTGS

Arabidopsis Description

GRF5Growth-regulating factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8A6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.