Factsheet for GSMUA_Achr8P26530_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr8P20680_001
GSMUA_Achr9P10760_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G22840.1	GSMUA_Achr10P...	AT5G28640.1	15326298
AT2G22840.1	GSMUA_Achr8P20680_001	AT5G28640.1	15326298
AT2G22840.1	GSMUA_Achr9P10760_001	AT5G28640.1	15326298
AT4G37740.1	GSMUA_Achr10P...	AT5G28640.1	15326298
AT4G37740.1	GSMUA_Achr8P20680_001	AT5G28640.1	15326298
AT4G37740.1	GSMUA_Achr9P10760_001	AT5G28640.1	15326298

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P15140_001	Banana	nucleus	26.22	77.05
GSMUA_Achr8P04970_001	Banana	nucleus	27.96	69.02
GSMUA_Achr7P27480_001	Banana	nucleus	25.94	61.28
GSMUA_Achr4P32310_001	Banana	nucleus	5.51	54.48
Os03t0729500-01	Rice	nucleus	17.15	53.95
GSMUA_Achr1P27000_001	Banana	nucleus	15.62	52.83
CDY55116	Canola	nucleus	9.9	50.35
Zm00001d007465_P001	Maize	nucleus	10.95	50.32
Os12t0484900-01	Rice	nucleus, plastid	14.44	50.12
GSMUA_AchrUn_...	Banana	nucleus	11.51	48.39
Zm00001d033876_P004	Maize	nucleus	19.67	47.55
EER90936	Sorghum	nucleus	19.87	47.42
KXG28671	Sorghum	nucleus	12.06	46.63
CDX83200	Canola	nucleus	12.69	46.19
CDY66422	Canola	nucleus	10.04	46.01
HORVU4Hr1G037480.5	Barley	nucleus	10.39	45.43
HORVU4Hr1G010080.2	Barley	nucleus	19.25	45.32
TraesCS4D01G059600.1	Wheat	nucleus	18.13	44.98
TraesCS4A01G255000.1	Wheat	nucleus	18.9	44.65
TraesCS4B01G060000.1	Wheat	nucleus	18.97	44.52
Zm00001d013346_P001	Maize	nucleus	17.85	43.76
CDX72654	Canola	nucleus	12.69	41.18
Bra017851.1-P	Field mustard	nucleus	12.69	40.72
Bra000575.1-P	Field mustard	nucleus	14.64	40.54
AT2G22840.1	Thale cress	nucleus	14.92	40.38
CDY29584	Canola	nucleus	11.44	40.2
CDX75672	Canola	nucleus	12.55	39.91
Bra011781.1-P	Field mustard	nucleus	12.48	39.69
CDX69322	Canola	nucleus	12.62	39.26
GSMUA_Achr5P20170_001	Banana	extracellular	4.6	38.6
AT4G37740.1	Thale cress	nucleus	13.6	36.45
GSMUA_Achr8P12060_001	Banana	extracellular	4.74	33.66
GSMUA_Achr11P...	Banana	mitochondrion, plasma membrane	4.74	33.17
GSMUA_Achr6P01270_001	Banana	nucleus	7.6	32.44
GSMUA_Achr10P...	Banana	nucleus	7.39	31.45
GSMUA_Achr1P23840_001	Banana	nucleus	7.67	30.64
GSMUA_Achr8P07650_001	Banana	extracellular	6.56	29.75
GSMUA_Achr3P22790_001	Banana	nucleus	7.95	29.08
GSMUA_Achr7P02330_001	Banana	nucleus	6.97	29.07
CDY21475	Canola	nucleus	10.04	28.97
GSMUA_Achr8P30640_001	Banana	nucleus	6.21	27.81
GSMUA_AchrUn_...	Banana	nucleus	7.46	26.03
GSMUA_Achr1P21940_001	Banana	nucleus	6.76	25.59
GSMUA_Achr2P04650_001	Banana	extracellular	7.6	25.29

Protein Annotations

MapMan:15.5.52.1	MapMan:19.4.5.2	Gene3D:2.10.25.150	Gene3D:2.10.55.10	Gene3D:3.10.170.20	Gene3D:3.90.132.10
ncoils:Coil	InterPro:EGF-like_CS	InterPro:EGF-like_dom	InterPro:EGF_extracell	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004222	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006508
GO:GO:0007155	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016787	GO:GO:0019538	GO:GO:0032502	InterPro:GRF	EnsemblPlantsGene:GSMUA_Achr8G26530_001	EnsemblPlants:GSMUA_Achr8P26530_001
EnsemblPlants:GSMUA_Achr8T26530_001	InterPro:Gln-Leu-Gln_QLQ	InterPro:IPR000742	InterPro:IPR014977	InterPro:IPR014978	UniProt:M0TTV6
PFAM:PF01457	PFAM:PF07974	PFAM:PF08879	PFAM:PF08880	PRINTS:PR00782	ScanProsite:PS00022
PFscan:PS50026	PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF22	InterPro:Peptidase_M8
SMART:SM00951	SUPFAM:SSF55486	UniParc:UPI0002957DB3	InterPro:WRC_dom	SEG:seg	:

Description

metalloendopeptidase/ metallopeptidase/ zinc ion binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G26530_001]

Coordinates

chr8:+:30042209..30064115

Molecular Weight (calculated)

156164.0 Da

IEP (calculated)

6.925

GRAVY (calculated)

-0.425

Length

1434 amino acids

Sequence
(BLAST)

0001: MDLGGVLGMD ALVGASTESG NLFSSSLLSQ ETEVGRQRGV FLSAFHKHER PAEPADYDLR SFKMARSEAL VSASTKAAHF LHRSNSLPLL PDGEQMLSFS
0101: STSKQSDMAI ASDGTLPYYN HPSAPSSTQS LYSGSSNANM QGVLARVRGP FTPSQWLELE HQALIYKYLV ANVPIPATLL IPIKRSLGAS GFPPLSAGSF
0201: ASGTLGWGPF HLGYSGNADP EPGRCRRTDG KKWRCSRDAV ADQKYCERHI NRGRHRSRKH VEGQTGHAAK AVSVITSSQS ASAVPDAISS GSLTNSQRQS
0301: KSLQSNNADP FHAQSNGKTS SCIHLTFSSL GDAMVLINKE DQNDPSQNSK GLSVLSPVNQ NSMNNLFPVS KQHNPFEETS SGRDFGFIST DSLLNPPSSS
0401: FSDNISFIPN SKPEVHSHPL RHFIDVCPKT QSDRSTVTWP DVEDTQLNKT QLAISIPMAC SDFSSSSSSN YDKLPLSPLK LSREYDLVNT GLGVGLLNEV
0501: CHQQVCWKPV SWEASMAGPL GEVLTSTNPT PKNQSKNCSS SSSLNLLSDG WDSGCQLESS PTGVLQKASF GSLSSSTGSS PRAENLKIHE STGSLCDDLL
0601: GSTIVNASTI VLLLVIFGGT GAKPQDSKPP FWQDTEAGEN VVHLTHSCIH DEILHRRRRP GRKEYSVTPQ VYHESSLSRS HHHGGRALLE VSSVSPLQKD
0701: TKQPIRIYLN YDAVGHSSDR DCRNVGDLVK LGEPPATSIS RTPVCNPHGD RPVFADCWYN CTVEDISGED KKQRLRKALG QTAEWFRRAL AVEPVKGNLR
0801: LSGYSACGQD GGVQLPHEYI EDGVADSDLV LLVTTRPTTG NTLAWAVACE RDQWGRAIAG HVNVAPRHLT AEAETLLSAT LIHEVMHVLG FDPHAFAHFR
0901: DERKRRRSQV TVQVMDEKLG RMVTRIVLPR VVMRARYHYG AFSENFTGLE LEDGGGRGTS GSHWEKRLLM NEIMTGSVDT RSVVSKMTLA LLEDSGWYQA
1001: NYSMADRLDW GRNQGTEFVT SPCNHWKGAY HCNTTQLSGC TYNREAEGYC PIVSYNGDLP KWAQYFPQAN KGGQSSLADY CTYFVAYSDG SCTDTNSARA
1101: PDRALGEVRG SNSRCMASSL VRTGFVRGSM TQGNGCYQHR CMNNTLEIAV DGIWRMCPEA GGPVQFPGFN GELICPAYHE LCSSTPVPIN GRCPGSCSFN
1201: GDCINGECHC FLGFHGNDCS RRSCPGNCSG HGTCHPNGIC ECESGRTGID CSTAICDEQC SLHGGVCDNG VCEFRCSDYA GYTCQNSSSL LPSLSICSDV
1301: LARDVFGQHC APSEPSILQQ LEAAVVMPNY NRLLPGGRTL FNILDNGYCA AAAKRLACWI SIQRCDEDGD NRLRVCHSAC RSYNAACGAG LDCSDQTLFS
1401: SEEEKDGQCT GYGEIRPWWI RRFGNLYLQS QRKL

Best Arabidopsis Sequence Match ( AT5G42620.2 )
(BLAST)

001: MEVLVPCCRL FVSNLRFVIS WVSLILLLLG ASDAKARHHH HHHQRIAVEG VESGVASHSC IHDQIIEQRK RPGRKVYSVT PQVYHEPRSV EKAFHHNGRV
101: LLSVFDEEKD VKQPIRIYLN YDAVGHSLDR DCQRVGNIVK LGEPPSSTFP AVPACNPNTK PPVSGDCWYN CTLDDISGKD KKHRLRKALE QTADWFRRAL
201: AVEPVKGNLR LSGYSACGQD GGVQLPREYV EEGIADTDLV LLVTTRPTTG NTLAWAVACE RDQWGRAIAG HVNVAPRHLT SESGTLLSAT LIHEVMHVLG
301: FDPHAFAHFR DERKRRRTEV TEQQMDEKLG RLVTRVVLPR VVMHSRHHYG AFSQNFSGLE LEDGGGRGTS GSHWEKRLLM NEIMTGSVDT RSVVSKMTLA
401: LLEDSGWYKA NYSMADRLDW GRNQGTQFVT SPCNMWKGAY HCNTTQLSGC TYNREAEGYC PILSYNGELP QWARYFPQPN KGGQSSLADY CTYFVAYSDG
501: SCTDINSARA PDRMLGEVRG SESRCMASSL VRTGFVRGSM TQGNGCYQHR CRNNLLEVAV EGVWKFCPQA GGPIRFPGFN GELICPAYHE LCSTSVVSVL
601: GQCPNSCNFN GDCVDGKCRC LLGYHGHDCR NRSCPNNCNG HGKCTTQGVC ICENGFTGID CSTAICDEQC SLHGGVCDNG VCEFRCSDYA GYTCQNSSKL
701: VTSLLVCKDV LEKDMSGQHC APREPSILQQ LEEVVVMPNY NRLFPGGARK LFNIFGNSYC DEAAKRLACW ISIQKCDIDG DDRLRVCHSA CQSYNMACGA
801: SLDCSDQTLF STAEEGDAEC TGSGEIRSPW FSSLWSRLVA KADLLGCKRV SIPVKQKHKW VKLLFVYLGV VQDKTIALHL IAKLHAHCT

Arabidopsis Description

Metalloendopeptidase / zinc ion binding protein [Source:UniProtKB/TrEMBL;Acc:F4K306]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.