Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY55116 | Canola | nucleus | 44.86 | 85.11 |
| CDX72654 | Canola | nucleus | 68.41 | 82.81 |
| CDY29584 | Canola | nucleus | 62.43 | 81.86 |
| CDY66422 | Canola | nucleus | 47.66 | 81.47 |
| Bra017851.1-P | Field mustard | nucleus | 67.85 | 81.21 |
| CDX75672 | Canola | nucleus | 68.22 | 80.93 |
| CDX69322 | Canola | nucleus | 69.53 | 80.69 |
| Bra011781.1-P | Field mustard | nucleus | 67.85 | 80.49 |
| AT2G22840.1 | Thale cress | nucleus | 59.44 | 60.0 |
| GSMUA_Achr4P32310_001 | Banana | nucleus | 13.27 | 48.97 |
| VIT_00s0494g00010.t01 | Wine grape | nucleus | 45.61 | 40.87 |
| Zm00001d007465_P001 | Maize | nucleus | 22.43 | 38.46 |
| KRG88739 | Soybean | nucleus | 42.43 | 38.22 |
| KRH05542 | Soybean | nucleus | 42.8 | 38.17 |
| Solyc02g092070.2.1 | Tomato | nucleus | 40.0 | 37.68 |
| KRG88736 | Soybean | nucleus | 42.06 | 37.56 |
| PGSC0003DMT400055151 | Potato | nucleus | 41.87 | 37.4 |
| KRH05543 | Soybean | nucleus | 42.24 | 37.11 |
| GSMUA_Achr3P15140_001 | Banana | nucleus | 32.9 | 36.07 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.43 | 35.19 |
| HORVU4Hr1G037480.5 | Barley | nucleus | 21.5 | 35.06 |
| Os03t0729500-01 | Rice | nucleus | 29.72 | 34.87 |
| KXG28671 | Sorghum | nucleus | 24.11 | 34.77 |
| GSMUA_Achr1P27000_001 | Banana | nucleus | 27.48 | 34.67 |
| Os12t0484900-01 | Rice | nucleus, plastid | 25.61 | 33.17 |
| GSMUA_Achr8P04970_001 | Banana | nucleus | 35.7 | 32.87 |
| GSMUA_Achr7P27480_001 | Banana | nucleus | 35.33 | 31.14 |
| EER90936 | Sorghum | nucleus | 34.95 | 31.11 |
| Zm00001d033876_P004 | Maize | nucleus | 34.39 | 31.03 |
| TraesCS4D01G059600.1 | Wheat | nucleus | 32.15 | 29.76 |
| HORVU4Hr1G010080.2 | Barley | nucleus | 33.64 | 29.56 |
| Zm00001d006338_P002 | Maize | mitochondrion | 15.33 | 29.5 |
| TraesCS4B01G060000.1 | Wheat | nucleus | 33.46 | 29.3 |
| TraesCS4A01G255000.1 | Wheat | nucleus | 33.08 | 29.16 |
| Zm00001d013346_P001 | Maize | nucleus | 31.78 | 29.06 |
| HORVU4Hr1G003440.12 | Barley | nucleus | 21.12 | 27.7 |
| Zm00001d033396_P003 | Maize | nucleus | 22.62 | 27.63 |
| EER93679 | Sorghum | nucleus | 21.68 | 26.67 |
| AT3G52910.1 | Thale cress | nucleus | 18.88 | 26.58 |
| AT5G53660.1 | Thale cress | nucleus | 18.13 | 26.58 |
| TraesCS4A01G291500.1 | Wheat | nucleus | 20.0 | 26.23 |
| AT2G36400.1 | Thale cress | nucleus | 19.44 | 26.13 |
| Os03t0674700-01 | Rice | nucleus | 20.75 | 26.06 |
| TraesCS4D01G020300.1 | Wheat | nucleus | 19.81 | 25.54 |
| Zm00001d013555_P001 | Maize | nucleus | 20.56 | 25.23 |
| AT2G06200.2 | Thale cress | endoplasmic reticulum, plasma membrane | 12.71 | 24.03 |
| AT3G13960.1 | Thale cress | nucleus | 15.33 | 20.65 |
| Zm00001d002049_P001 | Maize | cytosol, plastid | 3.55 | 19.39 |
| AT4G24150.1 | Thale cress | nucleus | 17.57 | 19.07 |
| AT2G45480.3 | Thale cress | nucleus | 12.71 | 15.78 |
| GSMUA_Achr8P26530_001 | Banana | nucleus | 36.45 | 13.6 |
Protein Annotations
| MapMan:15.5.52.1 | EntrezGene:829930 | UniProt:A0A178UXW8 | EMBL:AB493726 | ProteinID:AEE86833.1 | EMBL:AK176372 |
| EMBL:AK176432 | ArrayExpress:AT4G37740 | EnsemblPlantsGene:AT4G37740 | RefSeq:AT4G37740 | TAIR:AT4G37740 | RefSeq:AT4G37740-TAIR-G |
| EnsemblPlants:AT4G37740.1 | TAIR:AT4G37740.1 | EMBL:AY102635 | Unigene:At.2873 | Symbol:AtGRF2 | ProteinID:CAB38922.1 |
| ProteinID:CAB80439.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008285 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0032502 | GO:GO:0048364 | InterPro:GRF | InterPro:Gln-Leu-Gln_QLQ | InterPro:IPR014977 |
| InterPro:IPR014978 | RefSeq:NP_195488.2 | ProteinID:OAO98257.1 | PFAM:PF08879 | PFAM:PF08880 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007098 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 |
| PO:PO:0009046 | PO:PO:0009052 | PO:PO:0009066 | PO:PO:0009074 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0020144 | PO:PO:0025022 | PFscan:PS51666 | PFscan:PS51667 | PANTHER:PTHR31602 |
| PANTHER:PTHR31602:SF22 | UniProt:Q8L8A8 | SMART:SM00951 | UniParc:UPI000009F433 | InterPro:WRC_dom | SEG:seg |
Description
GRF2GRF2 [Source:UniProtKB/TrEMBL;Acc:A0A178UXW8]
Coordinates
chr4:-:17725337..17727909
Molecular Weight (calculated)
58588.0 Da
IEP (calculated)
8.894
GRAVY (calculated)
-0.674
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIGVHVLGS VTSNENESLG LKELIGTKQD RSGFIGEDCL QRSLKLARTT TRAEEEENLS SSVAAAYCKT MSFHQGIPLM RSASPLSSDS RRQEQMLSFS
101: DKPDALDFSK YVGLDNSSNN KNSLSPFLHQ IPPPSYFRSS GGYGSGGMMM NMSMQGNFTG VKGPFTLTQW AELEQQALIY KYITANVPVP SSLLISIKKS
201: FYPYGSLPPS SFGWGTFHLG FAGGNMDPEP GRCRRTDGKK WRCSRDAVPD QKYCERHINR GRHRSRKPVE VQSGQNQTAA AASKAVTTPQ QPVVAGNTNR
301: SNARASSNRS LAIGSQYINP STESLPNNRG VSIYPSTVNL QPKESPVIHQ KHRNNNNPFE FGHISSDSLL NPNTAKTYGS SFLDFSSNQE KHSGNHNHNS
401: WPEELTSDWT QLSMSIPIAS SSPSSTHNNN NAQEKTTLSP LRLSRELDLS IQTDETTIEP TVKKVNTWIP ISWGNSLGGP LGEVLNSTTN SPTFGSSPTG
501: VLQKSTFCSL SNNSSVSSPI AENNRHNGDY FHYTT
101: DKPDALDFSK YVGLDNSSNN KNSLSPFLHQ IPPPSYFRSS GGYGSGGMMM NMSMQGNFTG VKGPFTLTQW AELEQQALIY KYITANVPVP SSLLISIKKS
201: FYPYGSLPPS SFGWGTFHLG FAGGNMDPEP GRCRRTDGKK WRCSRDAVPD QKYCERHINR GRHRSRKPVE VQSGQNQTAA AASKAVTTPQ QPVVAGNTNR
301: SNARASSNRS LAIGSQYINP STESLPNNRG VSIYPSTVNL QPKESPVIHQ KHRNNNNPFE FGHISSDSLL NPNTAKTYGS SFLDFSSNQE KHSGNHNHNS
401: WPEELTSDWT QLSMSIPIAS SSPSSTHNNN NAQEKTTLSP LRLSRELDLS IQTDETTIEP TVKKVNTWIP ISWGNSLGGP LGEVLNSTTN SPTFGSSPTG
501: VLQKSTFCSL SNNSSVSSPI AENNRHNGDY FHYTT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.