Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79674 | Canola | nucleus | 81.66 | 88.32 |
| CDX84560 | Canola | nucleus | 81.66 | 88.32 |
| CDY43721 | Canola | nucleus | 78.64 | 88.17 |
| Bra023066.1-P | Field mustard | nucleus | 81.41 | 88.04 |
| Bra005268.1-P | Field mustard | nucleus | 85.18 | 87.37 |
| Bra017240.1-P | Field mustard | nucleus | 79.15 | 87.02 |
| CDX75039 | Canola | nucleus | 83.92 | 86.75 |
| CDX84126 | Canola | nucleus | 84.92 | 86.22 |
| AT3G52910.1 | Thale cress | nucleus | 69.35 | 72.63 |
| KRG96154 | Soybean | nucleus | 53.27 | 54.64 |
| KRH30830 | Soybean | nucleus | 45.98 | 54.63 |
| KRH67865 | Soybean | nucleus | 52.26 | 54.17 |
| KRH32671 | Soybean | nucleus | 44.97 | 53.27 |
| Solyc09g009200.1.1 | Tomato | nucleus | 48.24 | 50.39 |
| VIT_08s0007g03760.t01 | Wine grape | nucleus | 51.76 | 49.76 |
| Solyc10g083510.1.1 | Tomato | nucleus | 46.48 | 47.56 |
| PGSC0003DMT400072628 | Potato | nucleus | 45.73 | 46.55 |
| GSMUA_Achr3P22790_001 | Banana | nucleus | 43.22 | 43.88 |
| GSMUA_Achr8P07650_001 | Banana | extracellular | 34.42 | 43.35 |
| AT5G53660.1 | Thale cress | nucleus | 24.87 | 27.12 |
| AT2G06200.2 | Thale cress | endoplasmic reticulum, plasma membrane | 17.84 | 25.09 |
| AT4G37740.1 | Thale cress | nucleus | 26.13 | 19.44 |
| AT3G13960.1 | Thale cress | nucleus | 19.35 | 19.4 |
| AT2G22840.1 | Thale cress | nucleus | 25.63 | 19.25 |
| AT2G45480.3 | Thale cress | nucleus | 19.1 | 17.63 |
| AT4G24150.1 | Thale cress | nucleus | 21.36 | 17.24 |
Protein Annotations
| MapMan:15.5.52.1 | EntrezGene:818213 | ProteinID:AAD24624.1 | ProteinID:AEC09248.1 | EMBL:AK117417 | ArrayExpress:AT2G36400 |
| EnsemblPlantsGene:AT2G36400 | RefSeq:AT2G36400 | TAIR:AT2G36400 | RefSeq:AT2G36400-TAIR-G | EnsemblPlants:AT2G36400.1 | TAIR:AT2G36400.1 |
| EMBL:AY102636 | Symbol:AtGRF3 | EMBL:BT026472 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008285 | GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009624 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0032502 | GO:GO:0043565 | GO:GO:0044212 |
| GO:GO:0048364 | GO:GO:0061062 | InterPro:GRF | InterPro:Gln-Leu-Gln_QLQ | InterPro:IPR014977 | InterPro:IPR014978 |
| RefSeq:NP_181181.1 | PFAM:PF08879 | PFAM:PF08880 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000229 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0006339 | PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007130 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0020144 | PO:PO:0025022 | PO:PO:0025181 | PFscan:PS51666 | PFscan:PS51667 |
| PANTHER:PTHR31602 | PANTHER:PTHR31602:SF39 | UniProt:Q9SJR5 | SMART:SM00951 | UniParc:UPI00000A37D8 | InterPro:WRC_dom |
| SEG:seg | : | : | : | : | : |
Description
GRF3Growth-regulating factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJR5]
Coordinates
chr2:-:15270088..15273115
Molecular Weight (calculated)
43709.6 Da
IEP (calculated)
8.505
GRAVY (calculated)
-0.705
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLQLKQWRS QQQQQHQTES EEQPSAAKIP KHVFDQIHSH TATSTALPLF TPEPTSSKLS SLSPDSSSRF PKMGSFFSWA QWQELELQAL IYRYMLAGAA
101: VPQELLLPIK KSLLHLSPSY FLHHPLQHLP HYQPAWYLGR AAMDPEPGRC RRTDGKKWRC SRDVFAGHKY CERHMHRGRN RSRKPVETPT TVNATATSMA
201: SSVAAAATTT TATTTSTFAF GGGGGSEEVV GQGGSFFFSG SSNSSSELLH LSQSCSEMKQ ESNNMNNKRP YESHIGFSNN RSDGGHILRP FFDDWPRSSL
301: QEADNSSSPM SSATCLSISM PGNSSSDVSL KLSTGNEEGA RSNNNGRDQQ NMSWWSGGGS NHHHHNMGGP LAEALRSSSS SSPTSVLHQL GVSTQAFH
101: VPQELLLPIK KSLLHLSPSY FLHHPLQHLP HYQPAWYLGR AAMDPEPGRC RRTDGKKWRC SRDVFAGHKY CERHMHRGRN RSRKPVETPT TVNATATSMA
201: SSVAAAATTT TATTTSTFAF GGGGGSEEVV GQGGSFFFSG SSNSSSELLH LSQSCSEMKQ ESNNMNNKRP YESHIGFSNN RSDGGHILRP FFDDWPRSSL
301: QEADNSSSPM SSATCLSISM PGNSSSDVSL KLSTGNEEGA RSNNNGRDQQ NMSWWSGGGS NHHHHNMGGP LAEALRSSSS SSPTSVLHQL GVSTQAFH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.