Factsheet for AT2G45480.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039334.1-P	Field mustard	nucleus	72.16	73.0
CDY37044	Canola	nucleus	72.39	71.4
CDY27382	Canola	nucleus	71.93	69.82
AT2G06200.2	Thale cress	endoplasmic reticulum, plasma membrane	13.23	20.14
TraesCS2B01G256600.2	Wheat	nucleus	12.06	19.77
Os07t0467500-01	Rice	nucleus	12.3	19.7
TraesCS2D01G246600.1	Wheat	nucleus	12.06	19.7
EER99361	Sorghum	nucleus	12.3	19.56
Zm00001d021362_P001	Maize	extracellular, nucleus	12.06	19.33
AT2G36400.1	Thale cress	nucleus	17.63	19.1
Zm00001d006348_P001	Maize	nucleus	12.06	19.05
AT3G52910.1	Thale cress	nucleus	16.47	18.68
AT5G53660.1	Thale cress	nucleus	15.78	18.63
AT3G13960.1	Thale cress	nucleus	16.94	18.39
HORVU2Hr1G054270.3	Barley	plastid	12.06	17.33
TraesCS2A01G238700.1	Wheat	nucleus	12.06	16.3
AT4G37740.1	Thale cress	nucleus	15.78	12.71
AT2G22840.1	Thale cress	nucleus	15.08	12.26
AT4G24150.1	Thale cress	nucleus	13.23	11.56

Protein Annotations

MapMan:15.5.52.1	EntrezGene:819156	ProteinID:AAF18607.2	ProteinID:AAM14831.1	EMBL:AB493593	ProteinID:AEC10560.1
ProteinID:ANM61817.1	ArrayExpress:AT2G45480	EnsemblPlantsGene:AT2G45480	RefSeq:AT2G45480	TAIR:AT2G45480	RefSeq:AT2G45480-TAIR-G
EnsemblPlants:AT2G45480.3	EMBL:AY074647	Unigene:At.37017	Symbol:AtGRF9	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0032502	GO:GO:0048366	InterPro:GRF
InterPro:Gln-Leu-Gln_QLQ	InterPro:IPR014977	InterPro:IPR014978	RefSeq:NP_001324014.1	RefSeq:NP_850438.2	PFAM:PF08879
PFAM:PF08880	PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF3	UniProt:Q8S9M3
SMART:SM00951	UniParc:UPI000009CF6C	InterPro:WRC_dom	SEG:seg	:	:

Description

GRF9Growth-regulating factor 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8S9M3]

Coordinates

chr2:+:18745340..18747634

Molecular Weight (calculated)

48869.6 Da

IEP (calculated)

8.301

GRAVY (calculated)

-0.758

Length

431 amino acids

Sequence
(BLAST)

001: MKMQSPKMEQ EEVEEERMRN KWPWMKAAQL MEFRMQALVY RYIEAGLRVP HHLVVPIWNS LALSSSSNYN YHSSSLLSNK GVTHIDTLET EPTRCRRTDG
101: KKWRCSNTVL LFEKYCERHM HRGRKRSRKL VESSSEVASS STKYDNTYGL DRYNESQSHL HGTISGSSNA QVVTIASLPS ARSCENVIRP SLVISEFTNK
201: SVSHGRKNME MSYDDFINEK EASMCVGVVP LQGDESKPSV QKFFPEVSDK CLEAAKFSSN RKNDIIARSR EWKNMNVNGG LFHGIHFSPD TVLQERGCFR
301: LQGVETDNEP GRCRRTDGKK WRCSKDVLSG QKYCDKHMHR GMKKKHPVDT TNSHENAGFS PLTVETAVRS VVPCKDGDDQ KHSVSVMGIT LPRVSDEKST
401: SSCSTDTTIT DTALRGEDDD EEYLSLFSPG V

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.