CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021362_P001	Maize	extracellular, nucleus	90.04	90.71
Zm00001d006348_P001	Maize	nucleus	90.04	89.38
Os07t0467500-01	Rice	nucleus	76.01	76.58
TraesCS2D01G246600.1	Wheat	nucleus	74.17	76.14
TraesCS2B01G256600.2	Wheat	nucleus	73.43	75.67
TraesCS2A01G238700.1	Wheat	nucleus	74.17	63.01
HORVU2Hr1G054270.3	Barley	plastid	69.0	62.33
EES12787	Sorghum	nucleus	22.88	16.4
OQU76020	Sorghum	mitochondrion, nucleus	18.82	15.09
EER89089	Sorghum	cytosol, mitochondrion, nucleus	16.97	14.42
OQU85555	Sorghum	plastid	22.51	13.96
KXG28671	Sorghum	nucleus	18.45	13.48
KXG31209	Sorghum	mitochondrion, nucleus	19.19	13.13
CDY37044	Canola	nucleus	21.03	13.04
Bra039334.1-P	Field mustard	nucleus	20.3	12.91
CDY27382	Canola	nucleus	21.03	12.84
EER93679	Sorghum	nucleus	19.93	12.41
AT2G45480.3	Thale cress	nucleus	19.56	12.3
EER90936	Sorghum	nucleus	21.4	9.65

Protein Annotations

MapMan:15.5.52.1	EntrezGene:8074212	UniProt:C5X8F1	EnsemblPlants:EER99361	ProteinID:EER99361	ProteinID:EER99361.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0032502	InterPro:GRF	InterPro:Gln-Leu-Gln_QLQ
InterPro:IPR014977	InterPro:IPR014978	PFAM:PF08879	PFAM:PF08880	PFscan:PS51666	PFscan:PS51667
PANTHER:PTHR31602	PANTHER:PTHR31602:SF14	SMART:SM00951	EnsemblPlantsGene:SORBI_3002G297800	unigene:Sbi.13619	UniParc:UPI0001A83F08
InterPro:WRC_dom	RefSeq:XP_002462840.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:67394510..67397153

Molecular Weight (calculated)

28315.9 Da

IEP (calculated)

4.730

GRAVY (calculated)

-0.685

Length

271 amino acids

Sequence
(BLAST)

001: MAAEGEGKNP AGGGGGDNPQ HQQAVQAAPA PAAQGEAAQE AGGQGTGLEP EGEKADREGE GGGAGEKDDA ACRDLVLVED PEVVAVEDPE EAAATAALQE
101: EMKALVASIP DGAGAAFTAM QLQELEQQSR VYQYMAARVP VPTHLVFPVW KSVTGASSEG AQKYPTLMGL ATLCLDFGKN PEPEPGRCRR TDGKKWRCWR
201: STIPNEKYCE RHMHRGRKRP VQVVVEDDEP DSASGSKSTP GKATDGAKKA DDKSPSSKKL AVAAPAAVQS T

Best Arabidopsis Sequence Match ( AT4G37740.1 )
(BLAST)

001: MDIGVHVLGS VTSNENESLG LKELIGTKQD RSGFIGEDCL QRSLKLARTT TRAEEEENLS SSVAAAYCKT MSFHQGIPLM RSASPLSSDS RRQEQMLSFS
101: DKPDALDFSK YVGLDNSSNN KNSLSPFLHQ IPPPSYFRSS GGYGSGGMMM NMSMQGNFTG VKGPFTLTQW AELEQQALIY KYITANVPVP SSLLISIKKS
201: FYPYGSLPPS SFGWGTFHLG FAGGNMDPEP GRCRRTDGKK WRCSRDAVPD QKYCERHINR GRHRSRKPVE VQSGQNQTAA AASKAVTTPQ QPVVAGNTNR
301: SNARASSNRS LAIGSQYINP STESLPNNRG VSIYPSTVNL QPKESPVIHQ KHRNNNNPFE FGHISSDSLL NPNTAKTYGS SFLDFSSNQE KHSGNHNHNS
401: WPEELTSDWT QLSMSIPIAS SSPSSTHNNN NAQEKTTLSP LRLSRELDLS IQTDETTIEP TVKKVNTWIP ISWGNSLGGP LGEVLNSTTN SPTFGSSPTG
501: VLQKSTFCSL SNNSSVSSPI AENNRHNGDY FHYTT

Arabidopsis Description

GRF2GRF2 [Source:UniProtKB/TrEMBL;Acc:A0A178UXW8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.