Factsheet for Os07t0467500-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G256600.2	Wheat	nucleus	76.58	78.33
TraesCS2D01G246600.1	Wheat	nucleus	76.58	78.03
EER99361	Sorghum	nucleus	76.58	76.01
Zm00001d021362_P001	Maize	extracellular, nucleus	75.09	75.09
Zm00001d006348_P001	Maize	nucleus	75.84	74.73
TraesCS2A01G238700.1	Wheat	nucleus	76.95	64.89
HORVU2Hr1G054270.3	Barley	plastid	69.89	62.67
Os02t0678800-01	Rice	nucleus	24.91	31.75
Os04t0574500-01	Rice	cytosol, mitochondrion, nucleus, plastid	24.16	27.54
Os06t0204800-00	Rice	nucleus	20.07	17.94
Os02t0701300-01	Rice	nucleus, plastid	24.16	16.5
Os04t0600900-02	Rice	plastid	22.3	15.62
Os02t0776900-01	Rice	mitochondrion, nucleus	21.19	14.36
Os11t0551900-01	Rice	nucleus	7.81	13.46
CDY27382	Canola	nucleus	21.93	13.29
Os03t0674700-01	Rice	nucleus	20.82	13.15
Os12t0484900-01	Rice	nucleus, plastid	20.07	13.08
CDY37044	Canola	nucleus	21.19	13.04
Bra039334.1-P	Field mustard	nucleus	20.45	12.91
Os03t0729500-01	Rice	nucleus	21.56	12.72
AT2G45480.3	Thale cress	nucleus	19.7	12.3

Protein Annotations

MapMan:15.5.52.1	EntrezGene:4343178	EMBL:AK066400	ProteinID:BAD31080.1	ProteinID:BAF21505.1	ProteinID:BAT01404.1
ProteinID:DAA04955.1	ProteinID:EAZ39737.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0032502
InterPro:GRF	InterPro:Gln-Leu-Gln_QLQ	InterPro:IPR014977	InterPro:IPR014978	EnsemblPlantsGene:Os07g0467500	EnsemblPlants:Os07t0467500-01
PFAM:PF08879	PFAM:PF08880	PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF14
UniProt:Q6AWX8	SMART:SM00951	UniParc:UPI00003FE824	InterPro:WRC_dom	RefSeq:XP_015644678.1	SEG:seg

Description

GROWTH-REGULATING FACTOR 11WRC domain containing protein. (Os07t0467500-01)

Coordinates

chr7:+:16622696..16625277

Molecular Weight (calculated)

28002.5 Da

IEP (calculated)

4.480

GRAVY (calculated)

-0.645

Length

269 amino acids

Sequence
(BLAST)

001: MAAEGEAKKD SASNPPGGGG GGGGGEEEED SSLAVGEAAV GVGEAGGGGG GGEKADREEE EGKEDVEEGG VCKDLVLVED AVPVEDPEEA AATAALQEEM
101: KALVESVPVG AGAAFTAMQL QELEQQSRVY QYMAARVPVP THLVFPIWKS VTGASSEGAQ KYPTLMGLAT LCLDFGKNPE PEPGRCRRTD GKKWRCWRNA
201: IANEKYCERH MHRGRKRPVQ LVVEDDEPDS TSGSKPASGK ATEGGKKTDD KSSSSKKLAV AAPAAVEST

Best Arabidopsis Sequence Match ( AT3G13960.1 )
(BLAST)

001: MMSLSGSSGR TIGRPPFTPT QWEELEHQAL IYKYMVSGVP VPPELIFSIR RSLDTSLVSR LLPHQSLGWG CYQMGFGRKP DPEPGRCRRT DGKKWRCSRE
101: AYPDSKYCEK HMHRGRNRAR KSLDQNQTTT TPLTSPSLSF TNNNNPSPTL SSSSSSNSSS TTYSASSSSM DAYSNSNRFG LGGSSSNTRG YFNSHSLDYP
201: YPSTSPKQQQ QTLHHASALS LHQNTNSTSQ FNVLASATDH KDFRYFQGIG ERVGGVGERT FFPEASRSFQ DSPYHHHQQP LATVMNDPYH HCSTDHNKID
301: HHHTYSSSSS SQHLHHDHDH RQQQCFVLGA DMFNKPTRSV LANSSRQDQN QEEDEKDSSE SSKKSLHHFF GEDWAQNKNS SDSWLDLSSH SRLDTGS

Arabidopsis Description

GRF5Growth-regulating factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8A6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.