Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6B01G267500.1 | Wheat | nucleus | 75.83 | 75.83 |
Zm00001d051456_P001 | Maize | nucleus | 79.15 | 75.57 |
TraesCS6A01G257600.1 | Wheat | nucleus | 74.88 | 74.53 |
TraesCS6D01G238900.1 | Wheat | nucleus | 75.83 | 74.42 |
HORVU6Hr1G065740.4 | Barley | nucleus | 69.19 | 68.54 |
Os04t0574500-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 72.04 | 64.41 |
GSMUA_Achr5P20170_001 | Banana | extracellular | 51.66 | 63.74 |
GSMUA_Achr8P12060_001 | Banana | extracellular | 51.66 | 53.96 |
GSMUA_Achr11P... | Banana | mitochondrion, plasma membrane | 50.24 | 51.71 |
VIT_02s0025g04910.t01 | Wine grape | nucleus | 34.6 | 34.93 |
PGSC0003DMT400009997 | Potato | nucleus | 16.59 | 28.69 |
Solyc08g079800.2.1 | Tomato | nucleus | 26.07 | 25.23 |
Os07t0467500-01 | Rice | nucleus | 31.75 | 24.91 |
Os06t0204800-00 | Rice | nucleus | 28.91 | 20.27 |
Os04t0600900-02 | Rice | plastid | 34.6 | 19.01 |
Os02t0701300-01 | Rice | nucleus, plastid | 34.6 | 18.53 |
Os11t0551900-01 | Rice | nucleus | 12.8 | 17.31 |
Os12t0484900-01 | Rice | nucleus, plastid | 31.28 | 15.98 |
Os03t0674700-01 | Rice | nucleus | 30.33 | 15.02 |
Os02t0776900-01 | Rice | mitochondrion, nucleus | 27.96 | 14.86 |
Os03t0729500-01 | Rice | nucleus | 31.28 | 14.47 |
Protein Annotations
MapMan:15.5.52.1 | EntrezGene:4330314 | EMBL:AK108170 | ProteinID:BAD29245.1 | ProteinID:BAD29371.1 | ProteinID:BAF09649.1 |
ProteinID:BAS80287.1 | ProteinID:DAA04954.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0032502 |
InterPro:GRF | InterPro:Gln-Leu-Gln_QLQ | InterPro:IPR014977 | InterPro:IPR014978 | EnsemblPlantsGene:Os02g0678800 | EnsemblPlants:Os02t0678800-01 |
PFAM:PF08879 | PFAM:PF08880 | PFscan:PS51666 | PFscan:PS51667 | PANTHER:PTHR31602 | PANTHER:PTHR31602:SF3 |
UniProt:Q6EPP9 | SMART:SM00951 | UniParc:UPI00003CE91F | InterPro:WRC_dom | RefSeq:XP_015624931.1 | SEG:seg |
Description
GROWTH-REGULATING FACTOR 10Transcriptional activator/repressor, Reguration of KNOX gene, Oskn2 (regulator of meristem function), Floral organogenesis (Os02t0678800-01)
Coordinates
chr2:+:27727857..27728960
Molecular Weight (calculated)
22311.6 Da
IEP (calculated)
9.582
GRAVY (calculated)
-0.362
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEEKEADSP QPPSKLPRLS GADPNAGVVT MAAPPPPVGL GLGLGLGGDS RGERDVEASA AAAHKATALT FMQQQELEHQ VLIYRYFAAG APVPVHLVLP
101: IWKSVASSSF GPHRFPSLAV MGLGNLCFDY RSSMEPDPGR CRRTDGKKWR CSRDVVPGHK YCERHVHRGR GRSRKPVEAS AAATPANNGG GGGIVFSPTS
201: VLLAHGTARA T
101: IWKSVASSSF GPHRFPSLAV MGLGNLCFDY RSSMEPDPGR CRRTDGKKWR CSRDVVPGHK YCERHVHRGR GRSRKPVEAS AAATPANNGG GGGIVFSPTS
201: VLLAHGTARA T
001: MDLQLKQWRS QQQQQHQTES EEQPSAAKIP KHVFDQIHSH TATSTALPLF TPEPTSSKLS SLSPDSSSRF PKMGSFFSWA QWQELELQAL IYRYMLAGAA
101: VPQELLLPIK KSLLHLSPSY FLHHPLQHLP HYQPAWYLGR AAMDPEPGRC RRTDGKKWRC SRDVFAGHKY CERHMHRGRN RSRKPVETPT TVNATATSMA
201: SSVAAAATTT TATTTSTFAF GGGGGSEEVV GQGGSFFFSG SSNSSSELLH LSQSCSEMKQ ESNNMNNKRP YESHIGFSNN RSDGGHILRP FFDDWPRSSL
301: QEADNSSSPM SSATCLSISM PGNSSSDVSL KLSTGNEEGA RSNNNGRDQQ NMSWWSGGGS NHHHHNMGGP LAEALRSSSS SSPTSVLHQL GVSTQAFH
101: VPQELLLPIK KSLLHLSPSY FLHHPLQHLP HYQPAWYLGR AAMDPEPGRC RRTDGKKWRC SRDVFAGHKY CERHMHRGRN RSRKPVETPT TVNATATSMA
201: SSVAAAATTT TATTTSTFAF GGGGGSEEVV GQGGSFFFSG SSNSSSELLH LSQSCSEMKQ ESNNMNNKRP YESHIGFSNN RSDGGHILRP FFDDWPRSSL
301: QEADNSSSPM SSATCLSISM PGNSSSDVSL KLSTGNEEGA RSNNNGRDQQ NMSWWSGGGS NHHHHNMGGP LAEALRSSSS SSPTSVLHQL GVSTQAFH
Arabidopsis Description
GRF3Growth-regulating factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJR5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.