Factsheet for HORVU6Hr1G065740.4

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G267500.1	Wheat	nucleus	77.93	78.67
TraesCS6A01G257600.1	Wheat	nucleus	77.0	77.36
TraesCS6D01G238900.1	Wheat	nucleus	77.0	76.28
Os02t0678800-01	Rice	nucleus	68.54	69.19
Zm00001d051456_P001	Maize	nucleus	65.73	63.35
GSMUA_Achr5P20170_001	Banana	extracellular	46.95	58.48
GSMUA_Achr8P12060_001	Banana	extracellular	47.89	50.49
HORVU2Hr1G094460.2	Barley	mitochondrion, plasma membrane	53.05	50.45
GSMUA_Achr11P...	Banana	mitochondrion, plasma membrane	46.95	48.78
HORVU2Hr1G094470.2	Barley	nucleus	56.81	47.83
VIT_02s0025g04910.t01	Wine grape	nucleus	33.8	34.45
PGSC0003DMT400009997	Potato	nucleus	14.55	25.41
Solyc08g079800.2.1	Tomato	nucleus	24.88	24.31
HORVU2Hr1G054270.3	Barley	plastid	30.05	21.33
HORVU7Hr1G034610.4	Barley	mitochondrion	25.82	17.57
HORVU4Hr1G037480.5	Barley	nucleus	25.82	16.77
HORVU7Hr1G008680.11	Barley	cytosol, mitochondrion, nucleus, vacuole	29.11	15.54
HORVU6Hr1G068370.1	Barley	nucleus	28.17	15.38
HORVU0Hr1G016590.2	Barley	cytosol, nucleus	15.02	15.09
HORVU6Hr1G035720.1	Barley	cytosol, mitochondrion, nucleus	20.19	13.69
HORVU6Hr1G081210.1	Barley	nucleus	26.29	13.56
HORVU0Hr1G016610.1	Barley	plastid	25.82	13.19
HORVU4Hr1G003440.12	Barley	nucleus	24.88	12.99
HORVU4Hr1G010080.2	Barley	nucleus	32.86	11.49
HORVU0Hr1G026650.1	Barley	mitochondrion, nucleus	2.82	5.26

Protein Annotations

MapMan:15.5.52.1	UniProt:A0A287UGX0	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0032502
InterPro:GRF	InterPro:Gln-Leu-Gln_QLQ	EnsemblPlantsGene:HORVU6Hr1G065740	EnsemblPlants:HORVU6Hr1G065740.4	InterPro:IPR014977	InterPro:IPR014978
PFAM:PF08879	PFAM:PF08880	PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF3
SMART:SM00951	UniParc:UPI000B475374	InterPro:WRC_dom	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr6H:+:453128633..453129616

Molecular Weight (calculated)

22821.4 Da

IEP (calculated)

10.005

GRAVY (calculated)

-0.304

Length

213 amino acids

Sequence
(BLAST)

001: MADEKEGDSL QPPSKLPRLS SADENAGAVT MAVSSPLGLG LGLGLGGDSR GEQHALEARA VAAAAKSVLT FMQQQELEHQ VLIYRYFAAG APVPVHLVLP
101: IWKSVAASSF GPHRFPSLIG LGSMCFDYRS SMEPEPGRCR RTDGKKWRCS RDVVQGHKYC ERHXPVPTAS VMARGRGAKS CKKEIRRDFV AGVVPRWRGS
201: GFFCGSARHG SGA

Best Arabidopsis Sequence Match ( AT2G36400.1 )
(BLAST)

001: MDLQLKQWRS QQQQQHQTES EEQPSAAKIP KHVFDQIHSH TATSTALPLF TPEPTSSKLS SLSPDSSSRF PKMGSFFSWA QWQELELQAL IYRYMLAGAA
101: VPQELLLPIK KSLLHLSPSY FLHHPLQHLP HYQPAWYLGR AAMDPEPGRC RRTDGKKWRC SRDVFAGHKY CERHMHRGRN RSRKPVETPT TVNATATSMA
201: SSVAAAATTT TATTTSTFAF GGGGGSEEVV GQGGSFFFSG SSNSSSELLH LSQSCSEMKQ ESNNMNNKRP YESHIGFSNN RSDGGHILRP FFDDWPRSSL
301: QEADNSSSPM SSATCLSISM PGNSSSDVSL KLSTGNEEGA RSNNNGRDQQ NMSWWSGGGS NHHHHNMGGP LAEALRSSSS SSPTSVLHQL GVSTQAFH

Arabidopsis Description

GRF3Growth-regulating factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJR5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.