Factsheet for HORVU0Hr1G016590.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus

Predictor Summary:

cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G026650.1	Barley	mitochondrion, nucleus	53.77	100.0
HORVU6Hr1G068370.1	Barley	nucleus	75.94	41.28
HORVU0Hr1G016610.1	Barley	plastid	80.19	40.77
TraesCS6D01G245300.1	Wheat	plastid	66.98	34.72
TraesCS6A01G269600.1	Wheat	nucleus	66.04	34.31
TraesCS6B01G296900.1	Wheat	plastid	64.62	33.74
Zm00001d002429_P003	Maize	nucleus	46.23	27.3
EES12787	Sorghum	nucleus	45.75	25.66
Zm00001d026240_P006	Maize	plastid	46.23	24.69
HORVU2Hr1G094460.2	Barley	mitochondrion, plasma membrane	17.45	16.52
HORVU7Hr1G034610.4	Barley	mitochondrion	23.11	15.65
HORVU7Hr1G008680.11	Barley	cytosol, mitochondrion, nucleus, vacuole	28.3	15.04
HORVU6Hr1G065740.4	Barley	nucleus	15.09	15.02
HORVU2Hr1G094470.2	Barley	nucleus	17.45	14.62
HORVU6Hr1G081210.1	Barley	nucleus	25.47	13.08
HORVU2Hr1G054270.3	Barley	plastid	18.4	13.0
HORVU4Hr1G037480.5	Barley	nucleus	17.92	11.59
HORVU4Hr1G003440.12	Barley	nucleus	19.81	10.29
HORVU6Hr1G035720.1	Barley	cytosol, mitochondrion, nucleus	13.21	8.92
HORVU4Hr1G010080.2	Barley	nucleus	23.58	8.21

Protein Annotations

MapMan:15.5.52.1	UniProt:A0A287E383	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0032502	InterPro:GRF	EnsemblPlantsGene:HORVU0Hr1G016590	EnsemblPlants:HORVU0Hr1G016590.2	InterPro:IPR014977	PFAM:PF08879
PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF21	UniParc:UPI000B4619C2	InterPro:WRC_dom	SEG:seg

Description

No Description!

Coordinates

chrchrUn:+:89465802..89468582

Molecular Weight (calculated)

22010.0 Da

IEP (calculated)

10.501

GRAVY (calculated)

-0.690

Length

212 amino acids

Sequence
(BLAST)

001: RGGGGAGGRG VAGEAGALHG GAVQGAGARG AHIQVPGGRR ARPVESRAPH PPRLCAVRRE LFLRKKVDPE PGRCRRTDGK KWRCDKEAFS DSKHCENHMH
101: RGRNRSRKPV ETQLVPHSQP PPAASAVPPL ATGCQSHSLY PAIGGGGGGG NSMSSTFSSA LGPPQPHMAP YAALGGGGTC KDFRYTAYGV GPLADEHSKL
201: ITEATNTSME SP

Best Arabidopsis Sequence Match ( AT2G36400.1 )
(BLAST)

001: MDLQLKQWRS QQQQQHQTES EEQPSAAKIP KHVFDQIHSH TATSTALPLF TPEPTSSKLS SLSPDSSSRF PKMGSFFSWA QWQELELQAL IYRYMLAGAA
101: VPQELLLPIK KSLLHLSPSY FLHHPLQHLP HYQPAWYLGR AAMDPEPGRC RRTDGKKWRC SRDVFAGHKY CERHMHRGRN RSRKPVETPT TVNATATSMA
201: SSVAAAATTT TATTTSTFAF GGGGGSEEVV GQGGSFFFSG SSNSSSELLH LSQSCSEMKQ ESNNMNNKRP YESHIGFSNN RSDGGHILRP FFDDWPRSSL
301: QEADNSSSPM SSATCLSISM PGNSSSDVSL KLSTGNEEGA RSNNNGRDQQ NMSWWSGGGS NHHHHNMGGP LAEALRSSSS SSPTSVLHQL GVSTQAFH

Arabidopsis Description

GRF3Growth-regulating factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJR5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.