Factsheet for Zm00001d002429_P003

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 3
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12787	Sorghum	nucleus	88.86	84.39
Zm00001d026240_P006	Maize	plastid	89.42	80.86
Zm00001d005387_P001	Maize	nucleus	10.86	62.9
Zm00001d042010_P001	Maize	nucleus	11.14	57.97
TraesCS6B01G296900.1	Wheat	plastid	61.84	54.68
TraesCS6D01G245300.1	Wheat	plastid	61.84	54.28
TraesCS6A01G269600.1	Wheat	nucleus	61.0	53.68
Zm00001d017742_P001	Maize	plastid	59.89	52.7
HORVU6Hr1G068370.1	Barley	nucleus	56.27	51.79
HORVU0Hr1G016610.1	Barley	plastid	53.76	46.28
HORVU0Hr1G016590.2	Barley	cytosol, nucleus	27.3	46.23
Zm00001d014421_P001	Maize	cytosol	11.98	43.88
Zm00001d045533_P001	Maize	nucleus	41.23	40.44
Zm00001d035965_P004	Maize	nucleus	42.06	39.63
Zm00001d018260_P001	Maize	mitochondrion	32.87	31.38
Zm00001d051456_P001	Maize	nucleus	19.22	31.22
Zm00001d052112_P001	Maize	mitochondrion, nucleus	34.26	30.67
Zm00001d037117_P001	Maize	mitochondrion, nucleus	31.2	30.43
Zm00001d000238_P001	Maize	nucleus	32.03	29.34
Zm00001d006338_P002	Maize	mitochondrion	18.38	23.74
Zm00001d007465_P001	Maize	nucleus	20.06	23.08
Zm00001d006348_P001	Maize	nucleus	16.99	22.34
Zm00001d021362_P001	Maize	extracellular, nucleus	16.43	21.93
Zm00001d033396_P003	Maize	nucleus	22.28	18.26
Zm00001d013555_P001	Maize	nucleus	21.17	17.43
Zm00001d013346_P001	Maize	nucleus	27.3	16.75
Zm00001d033876_P004	Maize	nucleus	27.58	16.69
Zm00001d002049_P001	Maize	cytosol, plastid	3.34	12.24

Protein Annotations

MapMan:15.5.52.1	UniProt:A0A1D6E0P2	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0032502
InterPro:GRF	InterPro:Gln-Leu-Gln_QLQ	InterPro:IPR014977	InterPro:IPR014978	ProteinID:ONM14292.1	ProteinID:ONM14296.1
PFAM:PF08879	PFAM:PF08880	PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF21
SMART:SM00951	UniParc:UPI0008424F55	InterPro:WRC_dom	EnsemblPlantsGene:Zm00001d002429	EnsemblPlants:Zm00001d002429_P003	EnsemblPlants:Zm00001d002429_T003
SEG:seg	:	:	:	:	:

Description

GRF-transcription factor 8Putative growth-regulating factor 6

Coordinates

chr2:+:12492600..12496031

Molecular Weight (calculated)

38544.1 Da

IEP (calculated)

8.815

GRAVY (calculated)

-0.617

Length

359 amino acids

Sequence
(BLAST)

001: MPRALPCRVG EDAAAQAQQQ QQHAMSGRWA ARPPALFTAA QYEELEHQAL IYKYLVAGVP VPPDLLLPLR RGFVYHQPAL GYGPYFGKKV DPEPGRCRRT
101: DGKKWRCSKE AAPDSKYCER HMHRGRNRSR KPVEAQLVPP PHAQQQQQQQ APAPTAGFQS HPMYPSILAG NGGGGGGVGG GAGGGGTFGL GPTSQLHMDS
201: AAAYATAAGG GSKDLRYSAY GVKSLSDEHS QLLSGGGGMD ASMDNSWRLL PSQTAATFQA TSYPLFGALS GLDESTIASL PKTQREPLSF FGSDFVTPKQ
301: ENQTLRPFFD EWPKSRDSWP ELNEDNSLGS SATQLSISIP MAPSDFNTSS RSPNGIPSR

Best Arabidopsis Sequence Match ( AT3G13960.1 )
(BLAST)

001: MMSLSGSSGR TIGRPPFTPT QWEELEHQAL IYKYMVSGVP VPPELIFSIR RSLDTSLVSR LLPHQSLGWG CYQMGFGRKP DPEPGRCRRT DGKKWRCSRE
101: AYPDSKYCEK HMHRGRNRAR KSLDQNQTTT TPLTSPSLSF TNNNNPSPTL SSSSSSNSSS TTYSASSSSM DAYSNSNRFG LGGSSSNTRG YFNSHSLDYP
201: YPSTSPKQQQ QTLHHASALS LHQNTNSTSQ FNVLASATDH KDFRYFQGIG ERVGGVGERT FFPEASRSFQ DSPYHHHQQP LATVMNDPYH HCSTDHNKID
301: HHHTYSSSSS SQHLHHDHDH RQQQCFVLGA DMFNKPTRSV LANSSRQDQN QEEDEKDSSE SSKKSLHHFF GEDWAQNKNS SDSWLDLSSH SRLDTGS

Arabidopsis Description

GRF5Growth-regulating factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8A6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.