Factsheet for HORVU0Hr1G016610.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G026650.1	Barley	mitochondrion, nucleus	26.86	98.25
HORVU6Hr1G068370.1	Barley	nucleus	84.41	90.26
HORVU0Hr1G016590.2	Barley	cytosol, nucleus	40.77	80.19
TraesCS6B01G296900.1	Wheat	plastid	68.82	70.69
TraesCS6A01G269600.1	Wheat	nucleus	69.06	70.59
TraesCS6D01G245300.1	Wheat	plastid	69.06	70.42
Zm00001d002429_P003	Maize	nucleus	46.28	53.76
EES12787	Sorghum	nucleus	47.0	51.85
Zm00001d026240_P006	Maize	plastid	47.24	49.62
HORVU7Hr1G008680.11	Barley	cytosol, mitochondrion, nucleus, vacuole	29.5	30.83
HORVU7Hr1G034610.4	Barley	mitochondrion	23.02	30.67
HORVU2Hr1G094460.2	Barley	mitochondrion, plasma membrane	14.39	26.79
HORVU6Hr1G065740.4	Barley	nucleus	13.19	25.82
HORVU6Hr1G081210.1	Barley	nucleus	25.42	25.67
HORVU2Hr1G094470.2	Barley	nucleus	14.63	24.11
HORVU4Hr1G037480.5	Barley	nucleus	16.31	20.73
HORVU2Hr1G054270.3	Barley	plastid	13.67	19.0
HORVU4Hr1G003440.12	Barley	nucleus	17.75	18.14
HORVU6Hr1G035720.1	Barley	cytosol, mitochondrion, nucleus	12.95	17.2
HORVU4Hr1G010080.2	Barley	nucleus	23.98	16.42

Protein Annotations

MapMan:15.5.52.1	UniProt:A0A287E389	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0032502
InterPro:GRF	InterPro:Gln-Leu-Gln_QLQ	EnsemblPlantsGene:HORVU0Hr1G016610	EnsemblPlants:HORVU0Hr1G016610.1	InterPro:IPR014977	InterPro:IPR014978
PFAM:PF08879	PFAM:PF08880	PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF21
SMART:SM00951	UniParc:UPI000B483A80	InterPro:WRC_dom	SEG:seg	:	:

Description

No Description!

Coordinates

chrchrUn:-:89561655..89564811

Molecular Weight (calculated)

44027.4 Da

IEP (calculated)

8.225

GRAVY (calculated)

-0.551

Length

417 amino acids

Sequence
(BLAST)

001: XXXXHATAAP PPPPPPPPPP PASPSAATTP SPRKHASTHP VLGSCPSSFL FVSCLTSDVV RWGVVVRSGN GAGEKARADG GWLARPVPFT AAQYKELEHQ
101: ALIYKYLVAG VPVPSNLVHP IRRGVEDLAA RVYHNYLGIR RELFLRKKVD PEPGRCRRTD GKKWRCDKEA FSDSKHCENH MHRGRNRSRK PVETQLVPHS
201: QPPPAASAVP PLATGCQSHS LYPAIGGGGG GGNSMSSTFS SALGPPQPHM APYAALGGGG TCKDFRYTAY GVGSLADEHS KLITEAINTS MESPWCLPPS
301: SETTTFPLPS YPPQLGATSE LGQNNNSNSN SNAAKAERQQ QQPLGDFDSG AINPMEQDNQ TLRPFFDEWP KARDSWSDLT DDNSSLASFS ATQLSMSIPD
401: FSVASSQSPN SMLFAXX

Best Arabidopsis Sequence Match ( AT3G13960.1 )
(BLAST)

001: MMSLSGSSGR TIGRPPFTPT QWEELEHQAL IYKYMVSGVP VPPELIFSIR RSLDTSLVSR LLPHQSLGWG CYQMGFGRKP DPEPGRCRRT DGKKWRCSRE
101: AYPDSKYCEK HMHRGRNRAR KSLDQNQTTT TPLTSPSLSF TNNNNPSPTL SSSSSSNSSS TTYSASSSSM DAYSNSNRFG LGGSSSNTRG YFNSHSLDYP
201: YPSTSPKQQQ QTLHHASALS LHQNTNSTSQ FNVLASATDH KDFRYFQGIG ERVGGVGERT FFPEASRSFQ DSPYHHHQQP LATVMNDPYH HCSTDHNKID
301: HHHTYSSSSS SQHLHHDHDH RQQQCFVLGA DMFNKPTRSV LANSSRQDQN QEEDEKDSSE SSKKSLHHFF GEDWAQNKNS SDSWLDLSSH SRLDTGS

Arabidopsis Description

GRF5Growth-regulating factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8A6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.