Factsheet for HORVU2Hr1G054270.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G256600.2	Wheat	nucleus	76.33	87.07
TraesCS2D01G246600.1	Wheat	nucleus	75.67	85.98
TraesCS2A01G238700.1	Wheat	nucleus	76.0	71.47
Os07t0467500-01	Rice	nucleus	62.67	69.89
EER99361	Sorghum	nucleus	62.33	69.0
Zm00001d021362_P001	Maize	extracellular, nucleus	60.33	67.29
Zm00001d006348_P001	Maize	nucleus	60.67	66.67
HORVU6Hr1G065740.4	Barley	nucleus	21.33	30.05
HORVU2Hr1G094460.2	Barley	mitochondrion, plasma membrane	21.33	28.57
HORVU2Hr1G094470.2	Barley	nucleus	22.0	26.09
HORVU0Hr1G016590.2	Barley	cytosol, nucleus	13.0	18.4
HORVU7Hr1G034610.4	Barley	mitochondrion	17.0	16.29
HORVU6Hr1G035720.1	Barley	cytosol, mitochondrion, nucleus	16.67	15.92
HORVU6Hr1G068370.1	Barley	nucleus	20.33	15.64
HORVU7Hr1G008680.11	Barley	cytosol, mitochondrion, nucleus, vacuole	19.33	14.54
HORVU4Hr1G037480.5	Barley	nucleus	15.33	14.02
HORVU6Hr1G081210.1	Barley	nucleus	19.0	13.8
HORVU0Hr1G016610.1	Barley	plastid	19.0	13.67
CDY37044	Canola	nucleus	18.67	12.81
Bra039334.1-P	Field mustard	nucleus	18.0	12.68
CDY27382	Canola	nucleus	18.67	12.61
HORVU4Hr1G003440.12	Barley	nucleus	16.67	12.25
AT2G45480.3	Thale cress	nucleus	17.33	12.06
HORVU4Hr1G010080.2	Barley	nucleus	19.0	9.36
HORVU0Hr1G026650.1	Barley	mitochondrion, nucleus	3.0	7.89

Protein Annotations

MapMan:15.5.52.1	UniProt:A0A287I1H6	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0032502
InterPro:GRF	InterPro:Gln-Leu-Gln_QLQ	EnsemblPlantsGene:HORVU2Hr1G054270	EnsemblPlants:HORVU2Hr1G054270.3	InterPro:IPR014977	InterPro:IPR014978
PFAM:PF08879	PFAM:PF08880	PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF14
SMART:SM00951	UniParc:UPI000B460950	InterPro:WRC_dom	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:+:332787218..332789588

Molecular Weight (calculated)

32574.2 Da

IEP (calculated)

4.796

GRAVY (calculated)

-0.575

Length

300 amino acids

Sequence
(BLAST)

001: HHYSIFSPSC MPLSSFTLIA RAPYRRPFPS PSDPIPKIPF CRLLLRGPSA TMAAEGEDKN DTDSVGGAGG GVENTLEAAE EAILQAVGQE PGQELVGEAE
101: ESADREGNGD DARKEDSGCK DLVLVEDHVL VEDPEEAAVA TAALQEEMRV LLASVPEGAG ASFTAMQLQE LEQQSRVYQY MAARVPVPTH LVFPIWKSVT
201: GASSEGAQNY PTLMGLATLC LDFGKSLEPE PGRCRRTDGK KWRCWRKTIP NEKYCERHMH RGRKRPVQVI VEDDEPDSAS GSKSSSGKVT EGGKKTDDKS

Best Arabidopsis Sequence Match ( AT4G37740.1 )
(BLAST)

001: MDIGVHVLGS VTSNENESLG LKELIGTKQD RSGFIGEDCL QRSLKLARTT TRAEEEENLS SSVAAAYCKT MSFHQGIPLM RSASPLSSDS RRQEQMLSFS
101: DKPDALDFSK YVGLDNSSNN KNSLSPFLHQ IPPPSYFRSS GGYGSGGMMM NMSMQGNFTG VKGPFTLTQW AELEQQALIY KYITANVPVP SSLLISIKKS
201: FYPYGSLPPS SFGWGTFHLG FAGGNMDPEP GRCRRTDGKK WRCSRDAVPD QKYCERHINR GRHRSRKPVE VQSGQNQTAA AASKAVTTPQ QPVVAGNTNR
301: SNARASSNRS LAIGSQYINP STESLPNNRG VSIYPSTVNL QPKESPVIHQ KHRNNNNPFE FGHISSDSLL NPNTAKTYGS SFLDFSSNQE KHSGNHNHNS
401: WPEELTSDWT QLSMSIPIAS SSPSSTHNNN NAQEKTTLSP LRLSRELDLS IQTDETTIEP TVKKVNTWIP ISWGNSLGGP LGEVLNSTTN SPTFGSSPTG
501: VLQKSTFCSL SNNSSVSSPI AENNRHNGDY FHYTT

Arabidopsis Description

GRF2GRF2 [Source:UniProtKB/TrEMBL;Acc:A0A178UXW8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.