Factsheet for Zm00001d021362_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99361	Sorghum	nucleus	90.71	90.04
Zm00001d006348_P001	Maize	nucleus	88.1	86.81
Os07t0467500-01	Rice	nucleus	75.09	75.09
TraesCS2D01G246600.1	Wheat	nucleus	72.86	74.24
TraesCS2B01G256600.2	Wheat	nucleus	72.49	74.14
TraesCS2A01G238700.1	Wheat	nucleus	72.86	61.44
HORVU2Hr1G054270.3	Barley	plastid	67.29	60.33
Zm00001d005387_P001	Maize	nucleus	10.41	45.16
Zm00001d042010_P001	Maize	nucleus	10.41	40.58
Zm00001d014421_P001	Maize	cytosol	11.52	31.63
Zm00001d051456_P001	Maize	nucleus	25.28	30.77
Zm00001d002429_P003	Maize	nucleus	21.93	16.43
Zm00001d007465_P001	Maize	nucleus	17.84	15.38
Zm00001d026240_P006	Maize	plastid	22.68	15.37
Zm00001d035965_P004	Maize	nucleus	21.56	15.22
Zm00001d045533_P001	Maize	nucleus	20.45	15.03
Zm00001d017742_P001	Maize	plastid	21.93	14.46
Zm00001d018260_P001	Maize	mitochondrion	19.7	14.1
Zm00001d000238_P001	Maize	nucleus	20.45	14.03
Zm00001d006338_P002	Maize	mitochondrion	14.5	14.03
Zm00001d037117_P001	Maize	mitochondrion, nucleus	18.59	13.59
Zm00001d052112_P001	Maize	mitochondrion, nucleus	19.7	13.22
CDY37044	Canola	nucleus	20.82	12.81
Bra039334.1-P	Field mustard	nucleus	20.07	12.68
CDY27382	Canola	nucleus	20.82	12.61
Zm00001d033396_P003	Maize	nucleus	19.7	12.1
AT2G45480.3	Thale cress	nucleus	19.33	12.06
Zm00001d013555_P001	Maize	nucleus	18.96	11.7
Zm00001d013346_P001	Maize	nucleus	22.3	10.26
Zm00001d033876_P004	Maize	nucleus	21.56	9.78
Zm00001d002049_P001	Maize	cytosol, plastid	1.86	5.1

Protein Annotations

EntrezGene:100101542	MapMan:15.5.52.1	UniProt:A5HEG9	EMBL:BT042513	EMBL:BT087437	EMBL:EF515849
EMBL:EU960601	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0032502	InterPro:GRF
InterPro:Gln-Leu-Gln_QLQ	InterPro:IPR014977	InterPro:IPR014978	EMBL:KJ726874	ProteinID:ONM56958.1	PFAM:PF08879
PFAM:PF08880	PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF14	SMART:SM00951
UniParc:UPI000150B869	InterPro:WRC_dom	EnsemblPlantsGene:Zm00001d021362	EnsemblPlants:Zm00001d021362_P001	EnsemblPlants:Zm00001d021362_T001	SEG:seg

Description

GRF-transcription factor 3growth-regulating factor 9

Coordinates

chr7:+:149911394..149914056

Molecular Weight (calculated)

28542.2 Da

IEP (calculated)

4.883

GRAVY (calculated)

-0.717

Length

269 amino acids

Sequence
(BLAST)

001: MTAEGEAKNP SAGGGGDNPQ HQQAAPAPAP AQGEVAQEAA VQGTGQEQER DKADREVQGG AGEKDDGACR DLVLVEDPEV LAVEDPEEAA ATAALQEEMK
101: ALVASIPDGA GAAFTAMQLQ ELEQQSRVYQ YMAARVPVPT HLVFPVWKSV TGASSEGAQK YPTLMGLATL CLDFGKNPEP EPGRCRRTDG KKWRCWRNTI
201: PNEKYCERHM HRGRKRPVQV FLEDDEPDSA SGSKPAAPGK ATEGAKKADD KSPSSKKLAV AAPAAVQST

Best Arabidopsis Sequence Match ( AT4G37740.1 )
(BLAST)

001: MDIGVHVLGS VTSNENESLG LKELIGTKQD RSGFIGEDCL QRSLKLARTT TRAEEEENLS SSVAAAYCKT MSFHQGIPLM RSASPLSSDS RRQEQMLSFS
101: DKPDALDFSK YVGLDNSSNN KNSLSPFLHQ IPPPSYFRSS GGYGSGGMMM NMSMQGNFTG VKGPFTLTQW AELEQQALIY KYITANVPVP SSLLISIKKS
201: FYPYGSLPPS SFGWGTFHLG FAGGNMDPEP GRCRRTDGKK WRCSRDAVPD QKYCERHINR GRHRSRKPVE VQSGQNQTAA AASKAVTTPQ QPVVAGNTNR
301: SNARASSNRS LAIGSQYINP STESLPNNRG VSIYPSTVNL QPKESPVIHQ KHRNNNNPFE FGHISSDSLL NPNTAKTYGS SFLDFSSNQE KHSGNHNHNS
401: WPEELTSDWT QLSMSIPIAS SSPSSTHNNN NAQEKTTLSP LRLSRELDLS IQTDETTIEP TVKKVNTWIP ISWGNSLGGP LGEVLNSTTN SPTFGSSPTG
501: VLQKSTFCSL SNNSSVSSPI AENNRHNGDY FHYTT

Arabidopsis Description

GRF2GRF2 [Source:UniProtKB/TrEMBL;Acc:A0A178UXW8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.