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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d005387_P001 Maize nucleus 71.01 79.03
Zm00001d014421_P001 Maize cytosol 81.16 57.14
Zm00001d051456_P001 Maize nucleus 43.48 13.57
Zm00001d002429_P003 Maize nucleus 57.97 11.14
GSMUA_Achr6P01270_001 Banana nucleus 53.62 11.01
Zm00001d045533_P001 Maize nucleus 57.97 10.93
Zm00001d006338_P002 Maize mitochondrion 43.48 10.79
Zm00001d021362_P001 Maize extracellular, nucleus 40.58 10.41
Zm00001d006348_P001 Maize nucleus 40.58 10.26
Zm00001d035965_P004 Maize nucleus 56.52 10.24
Zm00001d026240_P006 Maize plastid 56.52 9.82
Zm00001d017742_P001 Maize plastid 55.07 9.31
Zm00001d007465_P001 Maize nucleus 42.03 9.29
Zm00001d018260_P001 Maize mitochondrion 49.28 9.04
Zm00001d052112_P001 Maize mitochondrion, nucleus 50.72 8.73
Zm00001d037117_P001 Maize mitochondrion, nucleus 46.38 8.7
Zm00001d000238_P001 Maize nucleus 46.38 8.16
KRH76298 Soybean nucleus 49.28 7.42
KRH65240 Soybean nucleus 49.28 7.26
Zm00001d013555_P001 Maize nucleus 44.93 7.11
Zm00001d033396_P003 Maize nucleus 44.93 7.08
HORVU0Hr1G026650.1 Barley mitochondrion, nucleus 11.59 7.02
Zm00001d013346_P001 Maize nucleus 44.93 5.3
Zm00001d033876_P004 Maize nucleus 44.93 5.23
Zm00001d002049_P001 Maize cytosol, plastid 1.45 1.02
CDX76250 Canola cytosol, golgi, mitochondrion, nucleus 0.0 0.0
Protein Annotations
MapMan:15.5.52.1UniProt:A0A1D6N0H7GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006351GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0032502InterPro:GRFInterPro:IPR014977ProteinID:ONM34291.1PFAM:PF08879PFscan:PS51667
PANTHER:PTHR31602PANTHER:PTHR31602:SF21UniParc:UPI000842DF8BInterPro:WRC_domEnsemblPlantsGene:Zm00001d042010EnsemblPlants:Zm00001d042010_P001
EnsemblPlants:Zm00001d042010_T001:::::
Description
Growth-regulating factor 6
Coordinates
chr3:-:147186678..147188685
Molecular Weight (calculated)
8469.1 Da
IEP (calculated)
9.968
GRAVY (calculated)
-1.309
Length
69 amino acids
Sequence
(BLAST)
1: MINICKRSYI THQVGYELYF GKTVYPEPER CRRTDDKKWR CSNEAVPVSK YCERQMHRDH NHSRKHVKK
Best Arabidopsis Sequence Match ( AT2G06200.2 )
(BLAST)
001: MDTLSIKTYL LLSYTFNFPI QIPIFNLSFF FISLSLSLFM ATRIPFTESQ WEELENQALV FKYLAANMPV PPHLLFLIKR PFLFSSSSSS SSSSSFFSPT
101: LSPHFGWNVY EMGMGRKIDA EPGRCRRTDG KKWRCSKEAY PDSKYCERHM HRGKNRSSSR KPPPTQFTPN LFLDSSSRRR RSGYMDDFFS IEPSGSIKSC
201: SGSAMEDNDD GSCRGINNEE KQPDRHCFIL GTDLRTRERP LMLEEKLKQR DHDNEEEQGS KRFYRFLDEW PSSKSSVSTS LFI
Arabidopsis Description
AtGRF6growth-regulating factor 6 [Source:TAIR;Acc:AT2G06200]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.