CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH65240	Soybean	nucleus	87.12	85.26
Zm00001d005387_P001	Maize	nucleus	7.21	53.23
Zm00001d042010_P001	Maize	nucleus	7.42	49.28
Zm00001d014421_P001	Maize	cytosol	7.64	35.71
GSMUA_Achr6P01270_001	Banana	nucleus	19.43	26.49
KRH27682	Soybean	nucleus	16.38	24.35
KRH23984	Soybean	nucleus	17.47	24.02
KRH47599	Soybean	nucleus	17.69	23.48
KRH29333	Soybean	nucleus	17.25	23.17
KRH77798	Soybean	nucleus	15.94	22.96
KRH06183	Soybean	nucleus	17.47	22.22
KRH12524	Soybean	nucleus	17.69	22.19
KRH02627	Soybean	nucleus	18.12	22.02
KRH37478	Soybean	nucleus	17.47	21.92
KRH19281	Soybean	nucleus	18.34	21.88
KRH30830	Soybean	nucleus	15.72	21.49
KRH32671	Soybean	nucleus	15.28	20.83
KRG96154	Soybean	nucleus	16.59	19.59
KRH67865	Soybean	nucleus	16.38	19.53
KRH76368	Soybean	nucleus	13.54	18.51
KRH39656	Soybean	nucleus, plastid	13.32	18.1
HORVU0Hr1G026650.1	Barley	mitochondrion, nucleus	4.37	17.54
KRG88736	Soybean	nucleus	19.65	15.03
KRH05542	Soybean	nucleus	19.65	15.0
KRG88739	Soybean	nucleus	18.78	14.48
KRH05543	Soybean	nucleus	19.0	14.29
KRH53600	Soybean	nucleus	17.69	14.01
KRH64328	Soybean	nucleus	17.47	13.49
CDX76250	Canola	cytosol, golgi, mitochondrion, nucleus	0.0	0.0

Protein Annotations

EntrezGene:100795050	MapMan:15.5.52.1	EMBL:ACUP02000602	EnsemblPlantsGene:GLYMA_01G144900	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0032502	InterPro:GRF	InterPro:Gln-Leu-Gln_QLQ	InterPro:IPR014977	InterPro:IPR014978
UniProt:K7K3V6	EnsemblPlants:KRH76298	ProteinID:KRH76298	ProteinID:KRH76298.1	PFAM:PF08879	PFscan:PS51666
PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF2	UniParc:UPI000295E457	InterPro:WRC_dom	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:47957030..47960786

Molecular Weight (calculated)

50080.9 Da

IEP (calculated)

9.913

GRAVY (calculated)

-0.648

Length

458 amino acids

Sequence
(BLAST)

001: MEAKPLRTVP SSHNTSGGGP QKKIDMGHKM VGDVGVVVVD ERKRVVVVKE EKENTSSYSV ELHLGVDASH SAPQEINHVI TEAQRRELHH QVFIFNHLAY
101: NLPPPYHLVQ FPSNMSEYSF LGFDHGSMVD PEPHRCRRTD GKKWRCGKNV VPNQKYCERH MHRGRNRSRK PVETSQINSH LATKPSSKSH NKPASRTQFE
201: ISNPNLMAIR HSDTSSTPSR SLSVANCSSA NNRWKNSASY ADYLTSFSSA SAVSPGSTLA TPVAPKMATF SSVTSIASDR GSCLNICQKD NKSKSCISNN
301: ISVKSGGKGR IVGDTNGIST GIGFSPTSVL QVSGCNPSYL NDRTNIESAS GRCRRTDGKK WQCKSAVLPG QKYCATHMHR GAKKRLTSHE PAVTIARLPN
401: SSVTTKMQKA HCAIPNTNLS MSVPASEPFI QCNEKSQSTS DTDTTISDTL NECSYASF

Best Arabidopsis Sequence Match ( AT2G45480.3 )
(BLAST)

001: MKMQSPKMEQ EEVEEERMRN KWPWMKAAQL MEFRMQALVY RYIEAGLRVP HHLVVPIWNS LALSSSSNYN YHSSSLLSNK GVTHIDTLET EPTRCRRTDG
101: KKWRCSNTVL LFEKYCERHM HRGRKRSRKL VESSSEVASS STKYDNTYGL DRYNESQSHL HGTISGSSNA QVVTIASLPS ARSCENVIRP SLVISEFTNK
201: SVSHGRKNME MSYDDFINEK EASMCVGVVP LQGDESKPSV QKFFPEVSDK CLEAAKFSSN RKNDIIARSR EWKNMNVNGG LFHGIHFSPD TVLQERGCFR
301: LQGVETDNEP GRCRRTDGKK WRCSKDVLSG QKYCDKHMHR GMKKKHPVDT TNSHENAGFS PLTVETAVRS VVPCKDGDDQ KHSVSVMGIT LPRVSDEKST
401: SSCSTDTTIT DTALRGEDDD EEYLSLFSPG V

Arabidopsis Description

GRF9Growth-regulating factor 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8S9M3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.