CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76298	Soybean	nucleus	85.26	87.12
Zm00001d005387_P001	Maize	nucleus	7.05	53.23
Zm00001d042010_P001	Maize	nucleus	7.26	49.28
Zm00001d014421_P001	Maize	cytosol	7.48	35.71
GSMUA_Achr6P01270_001	Banana	nucleus	17.52	24.4
KRH47599	Soybean	nucleus	17.52	23.77
KRH23984	Soybean	nucleus	16.45	23.12
KRH27682	Soybean	nucleus	15.17	23.05
KRH06183	Soybean	nucleus	17.31	22.5
KRH29333	Soybean	nucleus	16.24	22.29
KRH77798	Soybean	nucleus	14.96	22.01
KRH19281	Soybean	nucleus	17.95	21.88
KRH02627	Soybean	nucleus	17.52	21.75
KRH12524	Soybean	nucleus	16.88	21.64
KRH30830	Soybean	nucleus	15.38	21.49
KRH37478	Soybean	nucleus	16.67	21.37
KRH32671	Soybean	nucleus	14.96	20.83
HORVU0Hr1G026650.1	Barley	mitochondrion, nucleus	4.7	19.3
KRG96154	Soybean	nucleus	15.6	18.81
KRH67865	Soybean	nucleus	15.38	18.75
KRH76368	Soybean	nucleus	12.82	17.91
KRH39656	Soybean	nucleus, plastid	12.61	17.51
KRH05542	Soybean	nucleus	19.23	15.0
KRG88736	Soybean	nucleus	19.02	14.86
KRH53600	Soybean	nucleus	18.16	14.71
KRG88739	Soybean	nucleus	18.16	14.31
KRH05543	Soybean	nucleus	18.59	14.29
KRH64328	Soybean	nucleus	17.52	13.83
CDX76250	Canola	cytosol, golgi, mitochondrion, nucleus	0.0	0.0

Protein Annotations

EntrezGene:100306494	MapMan:15.5.52.1	UniProt:A0A0R0KKP4	EMBL:ACUP02001318	EnsemblPlantsGene:GLYMA_03G021900	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0032502	InterPro:GRF	InterPro:Gln-Leu-Gln_QLQ	InterPro:IPR014977
InterPro:IPR014978	EnsemblPlants:KRH65240	ProteinID:KRH65240	ProteinID:KRH65240.1	PFAM:PF08879	PFscan:PS51666
PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF2	UniParc:UPI0003DE7FDF	InterPro:WRC_dom	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:2286137..2289333

Molecular Weight (calculated)

50841.7 Da

IEP (calculated)

9.815

GRAVY (calculated)

-0.607

Length

468 amino acids

Sequence
(BLAST)

001: MEAKPLRTVP SSHNTSGVGG GPQKKIGMEH KMESRVVDER KRVVMVKEEN STSSPNSVEL HLGFDASHST PQEINHVITE AQRRELHHQV FIFNHLAYNL
101: PPPYHLVQFP SNMSEYSFLG FDHGIMVDPE PHRCRRTDGK KWRCGKNVVP NQKYCERHMH RGRNRSRKPV ETSQVNSPLA TKPCSKSHTK PSSKTQFEIS
201: SPNLIAIPHI DTSSTPSRSL SVTNCSSANN RSKNRAGYAD YLMSFSSAST VSPGTTLATP VAPKIAAFSS ATSVVASDSK SCLKICQKDN QSKSCISNNI
301: GVKSGGKGSI VGDTNTNGIS TGISFSPTSV LQVSVSGCNP SYLNDGTNIE AASGRCRRTD GKKWQCKSAV LPGQKYCATH MHRGAKKRLT SHEPAATATS
401: SAVTVARLPY SSATTNIQKA HCAIPNTNLS MSVQAREAFI QCNEKSQSSS DTDTTISDTL NEYSYASF

Best Arabidopsis Sequence Match ( AT2G45480.3 )
(BLAST)

001: MKMQSPKMEQ EEVEEERMRN KWPWMKAAQL MEFRMQALVY RYIEAGLRVP HHLVVPIWNS LALSSSSNYN YHSSSLLSNK GVTHIDTLET EPTRCRRTDG
101: KKWRCSNTVL LFEKYCERHM HRGRKRSRKL VESSSEVASS STKYDNTYGL DRYNESQSHL HGTISGSSNA QVVTIASLPS ARSCENVIRP SLVISEFTNK
201: SVSHGRKNME MSYDDFINEK EASMCVGVVP LQGDESKPSV QKFFPEVSDK CLEAAKFSSN RKNDIIARSR EWKNMNVNGG LFHGIHFSPD TVLQERGCFR
301: LQGVETDNEP GRCRRTDGKK WRCSKDVLSG QKYCDKHMHR GMKKKHPVDT TNSHENAGFS PLTVETAVRS VVPCKDGDDQ KHSVSVMGIT LPRVSDEKST
401: SSCSTDTTIT DTALRGEDDD EEYLSLFSPG V

Arabidopsis Description

GRF9Growth-regulating factor 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8S9M3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.