Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH12524 | Soybean | nucleus | 96.99 | 96.99 |
| KRH02627 | Soybean | nucleus | 75.34 | 72.94 |
| KRH19281 | Soybean | nucleus | 75.89 | 72.14 |
| Solyc07g041640.2.1 | Tomato | nucleus | 43.56 | 46.22 |
| KRH47599 | Soybean | nucleus | 40.55 | 42.9 |
| KRH06183 | Soybean | nucleus | 41.37 | 41.94 |
| KRH27682 | Soybean | nucleus | 34.25 | 40.58 |
| KRH77798 | Soybean | nucleus | 35.34 | 40.57 |
| KRH23984 | Soybean | nucleus | 35.89 | 39.34 |
| KRH29333 | Soybean | nucleus | 36.16 | 38.71 |
| Os02t0776900-01 | Rice | mitochondrion, nucleus | 41.1 | 37.78 |
| Os06t0204800-00 | Rice | nucleus | 30.68 | 37.21 |
| GSMUA_Achr8P30640_001 | Banana | nucleus | 32.6 | 37.19 |
| TraesCS6A01G335900.1 | Wheat | nucleus | 40.27 | 35.94 |
| HORVU6Hr1G081210.1 | Barley | nucleus | 40.55 | 35.84 |
| TraesCS6B01G366700.1 | Wheat | nucleus | 40.0 | 35.61 |
| TraesCS6D01G315700.1 | Wheat | nucleus | 40.27 | 35.51 |
| Zm00001d018260_P001 | Maize | mitochondrion | 36.44 | 35.37 |
| KXG31209 | Sorghum | mitochondrion, nucleus | 37.53 | 34.6 |
| TraesCS7B01G070200.1 | Wheat | nucleus | 29.32 | 33.86 |
| HORVU7Hr1G034610.4 | Barley | mitochondrion | 28.77 | 33.55 |
| Zm00001d052112_P001 | Maize | mitochondrion, nucleus | 36.71 | 33.42 |
| TraesCS7D01G166400.1 | Wheat | nucleus | 29.04 | 33.12 |
| GSMUA_Achr1P21940_001 | Banana | nucleus | 34.25 | 32.98 |
| OQU76020 | Sorghum | mitochondrion, nucleus | 30.41 | 32.84 |
| TraesCS7A01G165600.1 | Wheat | nucleus | 27.67 | 32.69 |
| GSMUA_Achr7P02330_001 | Banana | nucleus | 30.14 | 31.98 |
| Zm00001d037117_P001 | Maize | mitochondrion, nucleus | 29.59 | 29.35 |
| Zm00001d000238_P001 | Maize | nucleus | 31.51 | 29.34 |
| KRH30830 | Soybean | nucleus | 22.47 | 24.48 |
| KRH32671 | Soybean | nucleus | 22.19 | 24.11 |
| KRH76368 | Soybean | nucleus | 21.1 | 22.99 |
| KRH39656 | Soybean | nucleus, plastid | 21.1 | 22.85 |
| KRH67865 | Soybean | nucleus | 23.29 | 22.14 |
| KRG96154 | Soybean | nucleus | 23.01 | 21.65 |
| KRH76298 | Soybean | nucleus | 21.92 | 17.47 |
| KRH05542 | Soybean | nucleus | 28.22 | 17.17 |
| KRH53600 | Soybean | nucleus | 27.12 | 17.13 |
| KRH64328 | Soybean | nucleus | 27.67 | 17.03 |
| KRG88739 | Soybean | nucleus | 27.67 | 17.0 |
| KRG88736 | Soybean | nucleus | 27.67 | 16.86 |
| KRH65240 | Soybean | nucleus | 21.37 | 16.67 |
| KRH05543 | Soybean | nucleus | 27.67 | 16.58 |
Protein Annotations
| EntrezGene:100814271 | MapMan:15.5.52.1 | EMBL:ACUP02005454 | EnsemblPlantsGene:GLYMA_09G068700 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0032502 | InterPro:GRF | InterPro:Gln-Leu-Gln_QLQ | UniProt:I1L1P0 | InterPro:IPR014977 |
| InterPro:IPR014978 | EnsemblPlants:KRH37478 | ProteinID:KRH37478 | ProteinID:KRH37478.1 | PFAM:PF08879 | PFAM:PF08880 |
| PFscan:PS51666 | PFscan:PS51667 | PANTHER:PTHR31602 | PANTHER:PTHR31602:SF4 | SMART:SM00951 | UniParc:UPI00023CB33B |
| InterPro:WRC_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:6964285..6966271
Molecular Weight (calculated)
41537.1 Da
IEP (calculated)
8.185
GRAVY (calculated)
-0.924
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MMNGRNRFPF TPSQWQELEH QALIYKYMAS GISIPPDLLF TIKRSYFDSP LSSRLLPNQP QHFGWNYLQM GLGRKIDPEP GRCRRTDGKK WRCSKEAYPD
101: SKYCERHMHR GKNRSRKPVE VLKTTTPSST MTTTNTNSNA SSTQQAISSI TKINTLSPLA SSETHQHHPQ HYGSFLYHHH PPSRSSGIGL SFEDNRAPLF
201: LDTGSCSQSN TDCRSRYVYG EKEEVDEHAF FTEPCGVMKS FSASSMDDSW QLTPLTMSSS SSSSKQRSSF GLSSDYSCLQ LQSHSKQQQQ EHHQDQGCYM
301: FGGGQVVKEE PQKTVHRFFD EWPHKGREGS WLDLDDKSST TQLSISIPTC SHDFPTFSSR NHHDG
101: SKYCERHMHR GKNRSRKPVE VLKTTTPSST MTTTNTNSNA SSTQQAISSI TKINTLSPLA SSETHQHHPQ HYGSFLYHHH PPSRSSGIGL SFEDNRAPLF
201: LDTGSCSQSN TDCRSRYVYG EKEEVDEHAF FTEPCGVMKS FSASSMDDSW QLTPLTMSSS SSSSKQRSSF GLSSDYSCLQ LQSHSKQQQQ EHHQDQGCYM
301: FGGGQVVKEE PQKTVHRFFD EWPHKGREGS WLDLDDKSST TQLSISIPTC SHDFPTFSSR NHHDG
001: MDTLSIKTYL LLSYTFNFPI QIPIFNLSFF FISLSLSLFM ATRIPFTESQ WEELENQALV FKYLAANMPV PPHLLFLIKR PFLFSSSSSS SSSSSFFSPT
101: LSPHFGWNVY EMGMGRKIDA EPGRCRRTDG KKWRCSKEAY PDSKYCERHM HRGKNRSSSR KPPPTQFTPN LFLDSSSRRR RSGYMDDFFS IEPSGSIKSC
201: SGSAMEDNDD GSCRGINNEE KQPDRHCFIL GTDLRTRERP LMLEEKLKQR DHDNEEEQGS KRFYRFLDEW PSSKSSVSTS LFI
101: LSPHFGWNVY EMGMGRKIDA EPGRCRRTDG KKWRCSKEAY PDSKYCERHM HRGKNRSSSR KPPPTQFTPN LFLDSSSRRR RSGYMDDFFS IEPSGSIKSC
201: SGSAMEDNDD GSCRGINNEE KQPDRHCFIL GTDLRTRERP LMLEEKLKQR DHDNEEEQGS KRFYRFLDEW PSSKSSVSTS LFI
Arabidopsis Description
AtGRF6growth-regulating factor 6 [Source:TAIR;Acc:AT2G06200]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.