Factsheet for GSMUA_Achr7P02330_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P30640_001	Banana	nucleus	34.01	36.56
GSMUA_Achr5P20170_001	Banana	extracellular	17.15	34.5
GSMUA_Achr1P21940_001	Banana	nucleus	37.5	34.04
CDY70432	Canola	nucleus	23.84	33.74
Os06t0204800-00	Rice	nucleus	29.07	33.22
VIT_09s0002g01350.t01	Wine grape	nucleus	34.3	32.51
GSMUA_Achr4P32310_001	Banana	nucleus	13.66	32.41
GSMUA_Achr11P...	Banana	mitochondrion, plasma membrane	19.19	32.2
GSMUA_Achr8P12060_001	Banana	extracellular	18.6	31.68
OQU76020	Sorghum	mitochondrion, nucleus	31.1	31.66
KRH02627	Soybean	nucleus	34.3	31.3
GSMUA_Achr10P...	Banana	nucleus	30.52	31.16
KRH19281	Soybean	nucleus	34.59	30.99
Solyc07g041640.2.1	Tomato	nucleus	30.81	30.81
AT2G06200.2	Thale cress	endoplasmic reticulum, plasma membrane	25.0	30.39
Zm00001d018260_P001	Maize	mitochondrion	33.14	30.32
KRH37478	Soybean	nucleus	31.98	30.14
KRH12524	Soybean	nucleus	31.98	30.14
Os02t0776900-01	Rice	mitochondrion, nucleus	34.59	29.97
KRH47599	Soybean	nucleus	29.94	29.86
TraesCS7A01G165600.1	Wheat	nucleus	26.74	29.77
Zm00001d037117_P001	Maize	mitochondrion, nucleus	31.69	29.62
GSMUA_Achr6P01270_001	Banana	nucleus	28.78	29.46
VIT_11s0016g01250.t01	Wine grape	nucleus	33.14	29.46
PGSC0003DMT400033847	Potato	nucleus	22.97	29.26
TraesCS7B01G070200.1	Wheat	nucleus	26.74	29.11
HORVU7Hr1G034610.4	Barley	mitochondrion	26.45	29.07
KRH06183	Soybean	nucleus	30.23	28.89
TraesCS7D01G166400.1	Wheat	nucleus	26.74	28.75
GSMUA_Achr1P23840_001	Banana	nucleus	29.65	28.41
Zm00001d000238_P001	Maize	nucleus	31.69	27.81
KXG31209	Sorghum	mitochondrion, nucleus	31.98	27.78
Zm00001d052112_P001	Maize	mitochondrion, nucleus	31.98	27.43
TraesCS6A01G335900.1	Wheat	nucleus	32.56	27.38
HORVU6Hr1G081210.1	Barley	nucleus	32.85	27.36
TraesCS6B01G366700.1	Wheat	nucleus	32.56	27.32
TraesCS6D01G315700.1	Wheat	nucleus	32.56	27.05
GSMUA_Achr8P07650_001	Banana	extracellular	22.67	24.68
GSMUA_Achr2P04650_001	Banana	extracellular	30.81	24.59
GSMUA_AchrUn_...	Banana	nucleus	29.36	24.57
GSMUA_Achr3P22790_001	Banana	nucleus	26.45	23.21
GSMUA_Achr1P27000_001	Banana	nucleus	27.03	21.93
CDY33407	Canola	nucleus	25.0	21.5
Bra015184.1-P	Field mustard	nucleus	25.0	21.5
GSMUA_AchrUn_...	Banana	nucleus	19.48	19.65
GSMUA_Achr8P04970_001	Banana	nucleus	30.23	17.9
GSMUA_Achr3P15140_001	Banana	nucleus	24.71	17.42
GSMUA_Achr7P27480_001	Banana	nucleus	30.23	17.13
GSMUA_Achr8P26530_001	Banana	nucleus	29.07	6.97

Protein Annotations

MapMan:15.5.52.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0032502	InterPro:GRF
EnsemblPlantsGene:GSMUA_Achr7G02330_001	EnsemblPlants:GSMUA_Achr7P02330_001	EnsemblPlants:GSMUA_Achr7T02330_001	InterPro:Gln-Leu-Gln_QLQ	InterPro:IPR014977	InterPro:IPR014978
UniProt:M0TE23	PFAM:PF08879	PFAM:PF08880	PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602
PANTHER:PTHR31602:SF23	SMART:SM00951	UniParc:UPI0002953174	InterPro:WRC_dom	SEG:seg	:

Description

growth regulating factor protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G02330_001]

Coordinates

chr7:+:1822480..1824043

Molecular Weight (calculated)

39299.5 Da

IEP (calculated)

9.858

GRAVY (calculated)

-0.731

Length

344 amino acids

Sequence
(BLAST)

001: MSGISSSYPF TPSQWQELEQ QRLFYRYMVS GIPNPWDLSL RIRRSFLLEP TTMISPTVAY PPHLHLCWGR VRLGVGREGE DTEPGRCRRT DGKKWRCSKE
101: AFPGSKYCEK HMHRGKNRSR KPVEMSLADN LSTTAQPPSS FSSSTTTKSS TSNTPCHHHP YHLPVPAPEV SSFLTCPSSK SQHNTPTYNS ADIAYRKNSS
201: RFRPLGMNSL VGKGHMAFVP QQSTSSHSRI DLPREEKPQH CFVLGTDLKL EKPATVESKQ KPLLHFLDER PTTSNTLCLD SKADHSKTQL SISIPVAYHD
301: FPAFKSGFNR ERYRTSSVTF KLCINCDHYE LRLELIRRYS FWSQ

Best Arabidopsis Sequence Match ( AT3G13960.1 )
(BLAST)

001: MMSLSGSSGR TIGRPPFTPT QWEELEHQAL IYKYMVSGVP VPPELIFSIR RSLDTSLVSR LLPHQSLGWG CYQMGFGRKP DPEPGRCRRT DGKKWRCSRE
101: AYPDSKYCEK HMHRGRNRAR KSLDQNQTTT TPLTSPSLSF TNNNNPSPTL SSSSSSNSSS TTYSASSSSM DAYSNSNRFG LGGSSSNTRG YFNSHSLDYP
201: YPSTSPKQQQ QTLHHASALS LHQNTNSTSQ FNVLASATDH KDFRYFQGIG ERVGGVGERT FFPEASRSFQ DSPYHHHQQP LATVMNDPYH HCSTDHNKID
301: HHHTYSSSSS SQHLHHDHDH RQQQCFVLGA DMFNKPTRSV LANSSRQDQN QEEDEKDSSE SSKKSLHHFF GEDWAQNKNS SDSWLDLSSH SRLDTGS

Arabidopsis Description

GRF5Growth-regulating factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8A6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.