Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH37478 | Soybean | nucleus | 46.22 | 43.56 |
| KRH12524 | Soybean | nucleus | 45.93 | 43.29 |
| KRH02627 | Soybean | nucleus | 46.8 | 42.71 |
| KRH19281 | Soybean | nucleus | 46.8 | 41.93 |
| Solyc12g096070.1.1 | Tomato | nucleus | 36.63 | 36.52 |
| Solyc08g005430.2.1 | Tomato | nucleus | 37.79 | 36.52 |
| GSMUA_Achr8P30640_001 | Banana | nucleus | 32.56 | 35.0 |
| Solyc08g075950.1.1 | Tomato | nucleus | 36.63 | 34.9 |
| Os06t0204800-00 | Rice | nucleus | 30.52 | 34.88 |
| Os02t0776900-01 | Rice | mitochondrion, nucleus | 39.53 | 34.26 |
| Solyc08g068760.1.1 | Tomato | cytosol | 15.41 | 34.19 |
| Zm00001d018260_P001 | Maize | mitochondrion | 36.05 | 32.98 |
| TraesCS6A01G335900.1 | Wheat | nucleus | 38.95 | 32.76 |
| HORVU6Hr1G081210.1 | Barley | nucleus | 39.24 | 32.69 |
| TraesCS6B01G366700.1 | Wheat | nucleus | 38.95 | 32.68 |
| TraesCS6D01G315700.1 | Wheat | nucleus | 39.24 | 32.61 |
| KXG31209 | Sorghum | mitochondrion, nucleus | 37.5 | 32.58 |
| GSMUA_Achr1P21940_001 | Banana | nucleus | 34.88 | 31.66 |
| HORVU7Hr1G034610.4 | Barley | mitochondrion | 28.49 | 31.31 |
| GSMUA_Achr7P02330_001 | Banana | nucleus | 30.81 | 30.81 |
| OQU76020 | Sorghum | mitochondrion, nucleus | 30.23 | 30.77 |
| Zm00001d052112_P001 | Maize | mitochondrion, nucleus | 35.76 | 30.67 |
| TraesCS7A01G165600.1 | Wheat | nucleus | 27.03 | 30.1 |
| TraesCS7B01G070200.1 | Wheat | nucleus | 27.62 | 30.06 |
| TraesCS7D01G166400.1 | Wheat | nucleus | 27.33 | 29.38 |
| Solyc08g079800.2.1 | Tomato | nucleus | 18.02 | 28.44 |
| Zm00001d037117_P001 | Maize | mitochondrion, nucleus | 29.94 | 27.99 |
| Zm00001d000238_P001 | Maize | nucleus | 30.23 | 26.53 |
| Solyc09g009200.1.1 | Tomato | nucleus | 24.42 | 22.05 |
| Solyc10g083510.1.1 | Tomato | nucleus | 22.67 | 20.05 |
| Solyc01g091540.1.1 | Tomato | nucleus | 24.13 | 19.76 |
| Solyc03g082430.1.1 | Tomato | nucleus | 23.84 | 17.9 |
| Solyc04g077510.2.1 | Tomato | nucleus | 30.81 | 17.82 |
| Solyc02g092070.2.1 | Tomato | nucleus | 28.78 | 17.43 |
| Solyc08g083230.1.1 | Tomato | nucleus | 18.9 | 16.33 |
Protein Annotations
| MapMan:15.5.52.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0032502 | InterPro:GRF |
| InterPro:Gln-Leu-Gln_QLQ | InterPro:IPR014977 | InterPro:IPR014978 | UniProt:K4CE32 | PFAM:PF08879 | PFAM:PF08880 |
| PFscan:PS51666 | PFscan:PS51667 | PANTHER:PTHR31602 | PANTHER:PTHR31602:SF4 | SMART:SM00951 | EnsemblPlantsGene:Solyc07g041640.2 |
| EnsemblPlants:Solyc07g041640.2.1 | UniParc:UPI000276BA18 | InterPro:WRC_dom | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7:-:53821156..53822505
Molecular Weight (calculated)
39592.1 Da
IEP (calculated)
9.071
GRAVY (calculated)
-0.955
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSSTGRSRF PFTANQWQEL EHQALIYKYM VSGMPVPADL LYTIRRSLDS SLSSKLLIHQ PHHIGWNCFQ MGFGKKIDPE PGRCRRTDGK KWRCSKEAYP
101: DSKYCERHMH RGRNRSRKPV EIMTNNNTSS STTTRPIIPP TAIPISSINK NTNTCSPTSF SYLTSSSSST HEPHHNYPFH YRPPQDHTPK FLFESPTTYS
201: RSGMKEEVGE HVFFSSEASG TMRSTCGSNS IESDTWQLSP LTMSSSPMKQ RTTYSPSQST AHSYLQLQSL NESSRQNYYY HNDVEKEDHQ PKKVMHHFFD
301: EWPPKDNKHS WLDSDDKFSG LSRTQLSISI PNPSQDLFIT TNEK
101: DSKYCERHMH RGRNRSRKPV EIMTNNNTSS STTTRPIIPP TAIPISSINK NTNTCSPTSF SYLTSSSSST HEPHHNYPFH YRPPQDHTPK FLFESPTTYS
201: RSGMKEEVGE HVFFSSEASG TMRSTCGSNS IESDTWQLSP LTMSSSPMKQ RTTYSPSQST AHSYLQLQSL NESSRQNYYY HNDVEKEDHQ PKKVMHHFFD
301: EWPPKDNKHS WLDSDDKFSG LSRTQLSISI PNPSQDLFIT TNEK
001: MMSLSGSSGR TIGRPPFTPT QWEELEHQAL IYKYMVSGVP VPPELIFSIR RSLDTSLVSR LLPHQSLGWG CYQMGFGRKP DPEPGRCRRT DGKKWRCSRE
101: AYPDSKYCEK HMHRGRNRAR KSLDQNQTTT TPLTSPSLSF TNNNNPSPTL SSSSSSNSSS TTYSASSSSM DAYSNSNRFG LGGSSSNTRG YFNSHSLDYP
201: YPSTSPKQQQ QTLHHASALS LHQNTNSTSQ FNVLASATDH KDFRYFQGIG ERVGGVGERT FFPEASRSFQ DSPYHHHQQP LATVMNDPYH HCSTDHNKID
301: HHHTYSSSSS SQHLHHDHDH RQQQCFVLGA DMFNKPTRSV LANSSRQDQN QEEDEKDSSE SSKKSLHHFF GEDWAQNKNS SDSWLDLSSH SRLDTGS
101: AYPDSKYCEK HMHRGRNRAR KSLDQNQTTT TPLTSPSLSF TNNNNPSPTL SSSSSSNSSS TTYSASSSSM DAYSNSNRFG LGGSSSNTRG YFNSHSLDYP
201: YPSTSPKQQQ QTLHHASALS LHQNTNSTSQ FNVLASATDH KDFRYFQGIG ERVGGVGERT FFPEASRSFQ DSPYHHHQQP LATVMNDPYH HCSTDHNKID
301: HHHTYSSSSS SQHLHHDHDH RQQQCFVLGA DMFNKPTRSV LANSSRQDQN QEEDEKDSSE SSKKSLHHFF GEDWAQNKNS SDSWLDLSSH SRLDTGS
Arabidopsis Description
GRF5Growth-regulating factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8A6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.