Factsheet for Solyc08g068760.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g082430.1.1	Tomato	nucleus	79.35	26.86
PGSC0003DMT400008352	Potato	nucleus	77.42	26.73
Solyc08g079800.2.1	Tomato	nucleus	25.16	17.89
CDY51791	Canola	nucleus	34.19	16.21
Bra022667.1-P	Field mustard	nucleus	35.48	15.85
CDY28823	Canola	nucleus	35.48	15.85
Solyc07g041640.2.1	Tomato	nucleus	34.19	15.41
AT5G53660.1	Thale cress	nucleus	35.48	15.07
Solyc08g005430.2.1	Tomato	nucleus	33.55	14.61
Solyc12g096070.1.1	Tomato	nucleus	31.61	14.2
Solyc08g075950.1.1	Tomato	nucleus	32.9	14.13
Solyc09g009200.1.1	Tomato	nucleus	31.61	12.86
KRH64328	Soybean	nucleus	47.1	12.31
KRH53600	Soybean	nucleus	45.16	12.11
Solyc08g083230.1.1	Tomato	nucleus	29.68	11.56
Solyc10g083510.1.1	Tomato	nucleus	28.39	11.31
Solyc01g091540.1.1	Tomato	nucleus	29.03	10.71
VIT_16s0098g01080.t01	Wine grape	nucleus	34.19	9.2
Solyc02g092070.2.1	Tomato	nucleus	30.97	8.45
Solyc04g077510.2.1	Tomato	nucleus	30.97	8.07

Protein Annotations

MapMan:15.5.52.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0032502	InterPro:GRF
InterPro:Gln-Leu-Gln_QLQ	InterPro:IPR014977	InterPro:IPR014978	UniProt:K4CM98	PFAM:PF08879	PFAM:PF08880
PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF24	SMART:SM00951	EnsemblPlantsGene:Solyc08g068760.1
EnsemblPlants:Solyc08g068760.1.1	UniParc:UPI000276CAB0	InterPro:WRC_dom	SEG:seg	:	:

Description

No Description!

Coordinates

chr8:+:57895148..57895615

Molecular Weight (calculated)

17396.8 Da

IEP (calculated)

8.719

GRAVY (calculated)

-0.398

Length

155 amino acids

Sequence
(BLAST)

001: MENSKNCYTI CSTDEANLLP LPPSTAVVRS FDVATNSQGM ATALGYPFTW AQWKELDRQA MIYKYMVSAM SVPPDLLLSI FSGASHTTSA TGSVQGQRYT
101: TNIRDLEPGR CKRTDGKNWR CSRDVAPHKK SCEHHMHRGL SILKDGNLIQ VYIYF

Best Arabidopsis Sequence Match ( AT5G53660.1 )
(BLAST)

001: MDFLKVSDKT TIPYRSDSLF SLNQQQYKES SFGFRDMEIH PHPTPYAGNG LLGCYYYYPF TNAQLKELER QAMIYKYMIA SIPVPFDLLV SSPSSASPCN
101: NKNIAGDLEP GRCRRTDGKK WRCAKEVVSN HKYCEKHLHR GRPRSRKHVE PPYSRPNNNG GSVKNRDLKK LPQKLSSSSI KDKTLEPMEV SSSISNYRDS
201: RGSEKFTVLA TTEQENKYLN FIDVWSDGVR SSEKQSTTST PVSSSNGNLS LYSLDLSMGG NNLMGQDEMG LIQMGLGVIG SGSEDHHGYG PYGVTSSLEE
301: MSSWLAPMST TPGGPLAEIL RPSTNLAISG DIESYSLMET PTPSSSPSRV MKKMTSSVSD ESSQV

Arabidopsis Description

GRF7Growth-regulating factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJB8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.