Factsheet for Bra022667.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	peroxisome
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28823	Canola	nucleus	99.71	99.71
CDY51791	Canola	nucleus	90.49	96.02
AT5G53660.1	Thale cress	nucleus	77.52	73.7
Solyc08g068760.1.1	Tomato	cytosol	15.85	35.48
Bra023066.1-P	Field mustard	nucleus	27.67	26.09
Bra005268.1-P	Field mustard	nucleus	28.82	25.77
Bra028541.1-P	Field mustard	nucleus	25.94	24.59
Bra017240.1-P	Field mustard	nucleus	24.78	23.76
PGSC0003DMT400008352	Potato	nucleus	30.26	23.39
Bra006956.1-P	Field mustard	nucleus	25.65	23.3
Solyc03g082430.1.1	Tomato	nucleus	29.68	22.49
Bra011781.1-P	Field mustard	nucleus	28.82	22.17
Bra019244.1-P	Field mustard	nucleus	23.34	21.6
Bra017851.1-P	Field mustard	nucleus	25.65	19.91
Bra001532.1-P	Field mustard	nucleus	20.75	19.83
KRH64328	Soybean	nucleus	32.85	19.22
KRH53600	Soybean	nucleus	31.99	19.2
Bra013767.1-P	Field mustard	nucleus	20.46	19.14
Bra000575.1-P	Field mustard	nucleus	28.53	19.11
Bra027384.1-P	Field mustard	nucleus	21.33	18.93
Bra015184.1-P	Field mustard	nucleus	20.75	18.0
VIT_16s0098g01080.t01	Wine grape	nucleus	28.24	17.01
Bra019640.1-P	Field mustard	nucleus	25.07	16.17
Bra021521.1-P	Field mustard	cytosol	18.16	15.33
Bra039334.1-P	Field mustard	nucleus	18.73	15.26

Protein Annotations

MapMan:15.5.52.1	EnsemblPlantsGene:Bra022667	EnsemblPlants:Bra022667.1	EnsemblPlants:Bra022667.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009628	GO:GO:0009987	GO:GO:0010114	GO:GO:0010218	GO:GO:0032502	GO:GO:0080167
InterPro:GRF	InterPro:Gln-Leu-Gln_QLQ	InterPro:IPR014977	InterPro:IPR014978	UniProt:M4E1L7	PFAM:PF08879
PFAM:PF08880	PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF41	SMART:SM00951
UniParc:UPI0002546BF7	InterPro:WRC_dom	SEG:seg	:	:	:

Description

AT5G53660 (E=3e-121) AtGRF7 | AtGRF7 (GROWTH-REGULATING FACTOR 7); transcription activator

Coordinates

chrA02:-:8153904..8155033

Molecular Weight (calculated)

37983.6 Da

IEP (calculated)

8.649

GRAVY (calculated)

-0.625

Length

347 amino acids

Sequence
(BLAST)

001: MDFLKVSDKT TTPYRNNSLF GLSQQHMEIH PHPHPHPHVI TPHAGNGVMG CYYYYPFTNA QLKELERQAM IYKYMIASIP VPFDLLVSSS SYAPPCNNKN
101: AVGDLEPGRC RRTDGKKWRC SKEVVSNHKY CERHLHRGRP RSRKHVELPY SRPINIGGGS EKNRVLSSIK DTTVVEPKEV SSALANYRGL EIFPASASNE
201: QENKYLNFID VWSDGVRSSE KQSTPASSSP NGNPSLYSLD LSMGGNSLMG HDEMGLRVIG PGRDDPHGYG PYGGVVSSSL DEMSRWLAST SATPGGPLAE
301: ILRPNPSSAF SGEMEGNSLT ATPTPSSSPS RVVKKVTGSV SDDSSKI

Best Arabidopsis Sequence Match ( AT5G53660.1 )
(BLAST)

001: MDFLKVSDKT TIPYRSDSLF SLNQQQYKES SFGFRDMEIH PHPTPYAGNG LLGCYYYYPF TNAQLKELER QAMIYKYMIA SIPVPFDLLV SSPSSASPCN
101: NKNIAGDLEP GRCRRTDGKK WRCAKEVVSN HKYCEKHLHR GRPRSRKHVE PPYSRPNNNG GSVKNRDLKK LPQKLSSSSI KDKTLEPMEV SSSISNYRDS
201: RGSEKFTVLA TTEQENKYLN FIDVWSDGVR SSEKQSTTST PVSSSNGNLS LYSLDLSMGG NNLMGQDEMG LIQMGLGVIG SGSEDHHGYG PYGVTSSLEE
301: MSSWLAPMST TPGGPLAEIL RPSTNLAISG DIESYSLMET PTPSSSPSRV MKKMTSSVSD ESSQV

Arabidopsis Description

GRF7Growth-regulating factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJB8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.