Factsheet for Bra019244.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10989	Canola	nucleus	100.0	99.73
Bra013767.1-P	Field mustard	nucleus	63.47	64.15
AT4G24150.1	Thale cress	nucleus	75.47	57.4
VIT_02s0025g02680.t01	Wine grape	nucleus	21.6	45.25
Solyc08g083230.1.1	Tomato	nucleus	29.6	27.89
PGSC0003DMT400031893	Potato	nucleus	30.13	26.78
Bra022667.1-P	Field mustard	nucleus	21.6	23.34
Bra023066.1-P	Field mustard	nucleus	20.8	21.2
Bra028541.1-P	Field mustard	nucleus	20.53	21.04
Bra006956.1-P	Field mustard	nucleus	21.33	20.94
Bra005268.1-P	Field mustard	nucleus	21.07	20.36
Bra017240.1-P	Field mustard	nucleus	19.2	19.89
Bra011781.1-P	Field mustard	nucleus	22.67	18.85
Bra017851.1-P	Field mustard	nucleus	22.13	18.57
Bra000575.1-P	Field mustard	nucleus	23.2	16.8
Bra001532.1-P	Field mustard	nucleus	15.47	15.98
Bra027384.1-P	Field mustard	nucleus	16.0	15.35
Bra015184.1-P	Field mustard	nucleus	16.27	15.25
Bra039334.1-P	Field mustard	nucleus	16.27	14.32
Bra019640.1-P	Field mustard	nucleus	20.0	13.94
Bra021521.1-P	Field mustard	cytosol	13.6	12.41

Protein Annotations

MapMan:15.5.52.1	EnsemblPlantsGene:Bra019244	EnsemblPlants:Bra019244.1	EnsemblPlants:Bra019244.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0032502	InterPro:GRF	InterPro:Gln-Leu-Gln_QLQ	InterPro:IPR014977	InterPro:IPR014978
UniProt:M4DRV1	PFAM:PF08879	PFAM:PF08880	PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602
PANTHER:PTHR31602:SF2	SMART:SM00951	UniParc:UPI0002540F74	InterPro:WRC_dom	SEG:seg	:

Description

AT4G24150 (E=2e-075) AtGRF8 | AtGRF8 (GROWTH-REGULATING FACTOR 8); transcription activator

Coordinates

chrA03:+:25506002..25507411

Molecular Weight (calculated)

40722.0 Da

IEP (calculated)

7.113

GRAVY (calculated)

-0.639

Length

375 amino acids

Sequence
(BLAST)

001: MLPSHHYHSY SSPASASFCY CSNGVADPIF SASNTSTLGE MFSLGGSNST AGVSVADPFF TLTSSGEMGR SMSGKEGAAF SEAQWQELER QRNIFKYMMA
101: SLPVPSELLS PFSRNHTNNH DVTVARGGSL KLGIASNASN NTADMEPWRC KRTDGKKWRC SRNVVPDQKY CERHAHKSRP RSRKHVETPS HSHHNDARTT
201: KNVASQFATA YPQFYGPPLS QFSAVSTLPP ASSSYDHHHS GLRWLMKEGD SIATLNPEIH EAAQLKVGSS RELKRGFEYD LNYIQNDPLV DQRFGALEGE
301: QDEAMGSSLT LSMAGGGGME EGEGRSQHQW ISHEGPSWLC STTPGGPLAE ALCLGVSNNP STSTTTTSSC SRSSS

Best Arabidopsis Sequence Match ( AT4G24150.2 )
(BLAST)

001: MRMLLGIPYV DKSVLSNSVL ERGKQDKSKL LLVDKCHYEL DVEERKEDFV GGFGFGVVEN SHKDVMVLPH HHYYPSYSSP SSSSLCYCSA GVSDPMFSVS
101: SNQAYTSSHS GMFTPAGSGS AAVTVADPFF SLSSSGEMRR SMNEDAGAAF SEAQWHELER QRNIYKYMMA SVPVPPELLT PFPKNHQSNT NPDVTVAVAT
201: GGSLQLGIAS SASNNTADLE PWRCKRTDGK KWRCSRNVIP DQKYCERHTH KSRPRSRKHV ESSHQSSHHN DIRTAKNDTS QLVRTYPQFY GQPISQIPVL
301: STLPSASSPY DHHRGLRWFT KEDDAIGTLN PETQEAVQLK VGSSRELKRG FDYDLNFRQK EPIVDQSFGA LQGLLSLNQT PQHNQETRQF VVEGKQDEAM
401: GSSLTLSMAG GGMEETEGTN QHQWVSHEGP SWLYSTTPGG PLAEALCLGV SNNPSSSTTT SSCSRSSS

Arabidopsis Description

GRF8Growth-regulating factor 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU44]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.