Factsheet for AT4G24150.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, vacuole
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019244.1-P	Field mustard	nucleus	57.4	75.47
CDY10989	Canola	nucleus	57.4	75.27
CDX92617	Canola	nucleus	61.66	74.69
CDY03485	Canola	nucleus	51.12	72.41
CDY72447	Canola	nucleus, plastid	49.09	70.35
Bra013767.1-P	Field mustard	nucleus	52.33	69.54
VIT_02s0025g02680.t01	Wine grape	nucleus	17.85	49.16
Solyc08g083230.1.1	Tomato	nucleus	22.31	27.64
PGSC0003DMT400031893	Potato	nucleus	23.12	27.01
AT5G53660.1	Thale cress	nucleus	17.65	23.84
AT3G52910.1	Thale cress	nucleus	16.84	21.84
AT2G36400.1	Thale cress	nucleus	17.24	21.36
AT2G06200.2	Thale cress	endoplasmic reticulum, plasma membrane	11.56	20.14
AT2G22840.1	Thale cress	nucleus	19.47	18.11
AT4G37740.1	Thale cress	nucleus	19.07	17.57
AT3G13960.1	Thale cress	nucleus	13.39	16.62
AT2G45480.3	Thale cress	nucleus	11.56	13.23

Protein Annotations

MapMan:15.5.52.1	EntrezGene:828515	ProteinID:AAB63610.1	ProteinID:AEE84855.1	ArrayExpress:AT4G24150	EnsemblPlantsGene:AT4G24150
RefSeq:AT4G24150	TAIR:AT4G24150	RefSeq:AT4G24150-TAIR-G	EnsemblPlants:AT4G24150.1	TAIR:AT4G24150.1	Symbol:AtGRF8
ProteinID:CAB51658.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009536
GO:GO:0009941	GO:GO:0009987	GO:GO:0032502	GO:GO:0048366	InterPro:GRF	InterPro:Gln-Leu-Gln_QLQ
InterPro:IPR014977	InterPro:IPR014978	RefSeq:NP_001329477.1	RefSeq:NP_194146.1	PFAM:PF08879	PFAM:PF08880
PO:PO:0000037	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007611
PO:PO:0007616	PO:PO:0009009	PO:PO:0009010	PO:PO:0009031	PO:PO:0009046	PO:PO:0009052
PO:PO:0020003	PO:PO:0020144	PO:PO:0025022	PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602
PANTHER:PTHR31602:SF2	UniProt:Q9SU44	SMART:SM00951	UniParc:UPI000009D2FF	InterPro:WRC_dom	SEG:seg

Description

GRF8Growth-regulating factor 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU44]

Coordinates

chr4:+:12535972..12539555

Molecular Weight (calculated)

54611.6 Da

IEP (calculated)

6.926

GRAVY (calculated)

-0.626

Length

493 amino acids

Sequence
(BLAST)

001: MRMLLGIPYV DKSVLSNSVL ERGKQDKSKL LLVDKCHYEL DVEERKEDFV GGFGFGVVEN SHKDVMVLPH HHYYPSYSSP SSSSLCYCSA GVSDPMFSVS
101: SNQAYTSSHS GMFTPAGSGS AAVTVADPFF SLSSSGEMRR SMNEDAGAAF SEAQWHELER QRNIYKYMMA SVPVPPELLT PFPKNHQSNT NPDVDTYRSG
201: MFSIYADYKN LPLSMWMTVT VAVATGGSLQ LGIASSASNN TADLEPWRCK RTDGKKWRCS RNVIPDQKYC ERHTHKSRPR SRKHVESSHQ SSHHNDIRTA
301: KNDTSQLVRT YPQFYGQPIS QIPVLSTLPS ASSPYDHHRG LRWFTKEDDA IGTLNPETQE AVQLKVGSSR ELKRGFDYDL NFRQKEPIVD QSFGALQGLL
401: SLNQTPQHNQ ETRQFVVEGK QDEAMGSSLT LSMAGGGMEE TEGTNQHQWV SHEGPSWLYS TTPGGPLAEA LCLGVSNNPS SSTTTSSCSR SSS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.