Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019244.1-P | Field mustard | nucleus | 99.73 | 100.0 |
| CDX92617 | Canola | nucleus | 89.36 | 82.56 |
| CDY72447 | Canola | nucleus, plastid | 64.1 | 70.06 |
| CDY03485 | Canola | nucleus | 60.37 | 65.23 |
| AT4G24150.1 | Thale cress | nucleus | 75.27 | 57.4 |
| VIT_02s0025g02680.t01 | Wine grape | nucleus | 21.54 | 45.25 |
| Solyc08g083230.1.1 | Tomato | nucleus | 29.52 | 27.89 |
| PGSC0003DMT400031893 | Potato | nucleus | 30.05 | 26.78 |
| CDY55116 | Canola | nucleus | 19.95 | 26.6 |
| CDY66422 | Canola | nucleus | 20.74 | 24.92 |
| CDY51791 | Canola | nucleus | 21.28 | 24.46 |
| CDY28823 | Canola | nucleus | 21.54 | 23.34 |
| CDX73595 | Canola | nucleus | 21.54 | 21.26 |
| CDX79674 | Canola | nucleus | 20.74 | 21.2 |
| CDX84560 | Canola | nucleus | 20.74 | 21.2 |
| CDX67545 | Canola | nucleus | 20.48 | 21.15 |
| CDX83200 | Canola | nucleus | 22.07 | 21.07 |
| CDY13333 | Canola | nucleus | 20.21 | 20.77 |
| CDX78132 | Canola | nucleus | 20.74 | 20.69 |
| CDX75039 | Canola | nucleus | 21.01 | 20.52 |
| CDY43721 | Canola | nucleus | 19.15 | 20.28 |
| CDY29584 | Canola | nucleus | 21.81 | 20.1 |
| CDX84126 | Canola | nucleus | 20.74 | 19.9 |
| CDY70432 | Canola | nucleus | 12.5 | 19.34 |
| CDX72654 | Canola | nucleus | 22.34 | 19.0 |
| CDX75672 | Canola | nucleus | 22.61 | 18.85 |
| CDX76249 | Canola | nucleus | 20.21 | 18.58 |
| CDX69322 | Canola | nucleus | 22.34 | 18.22 |
| CDX71979 | Canola | nucleus | 17.02 | 16.62 |
| CDY39081 | Canola | nucleus | 17.02 | 16.08 |
| CDX82503 | Canola | nucleus | 15.43 | 15.85 |
| CDX75742 | Canola | nucleus | 15.16 | 15.62 |
| CDX97531 | Canola | nucleus | 15.96 | 15.46 |
| CDY55209 | Canola | nucleus | 15.96 | 15.38 |
| CDY33407 | Canola | nucleus | 16.22 | 15.25 |
| CDY66284 | Canola | nucleus | 21.01 | 14.68 |
| CDY37044 | Canola | nucleus | 16.22 | 13.96 |
| CDY21475 | Canola | nucleus | 18.35 | 13.88 |
| CDY27382 | Canola | nucleus | 16.22 | 13.74 |
| CDX76250 | Canola | cytosol, golgi, mitochondrion, nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.52.1 | GO:A0A078FDG4 | UniProt:A0A078FDG4 | EnsemblPlants:CDY10989 | ProteinID:CDY10989 | ProteinID:CDY10989.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0032502 | InterPro:GRF | EnsemblPlantsGene:GSBRNA2T00048934001 |
| InterPro:Gln-Leu-Gln_QLQ | InterPro:IPR014977 | InterPro:IPR014978 | PFAM:PF08879 | PFAM:PF08880 | PFscan:PS51666 |
| PFscan:PS51667 | PANTHER:PTHR31602 | PANTHER:PTHR31602:SF2 | SMART:SM00951 | UniParc:UPI0004EEBEDE | InterPro:WRC_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaA03g46480DBnaA03g46480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDG4]
Coordinates
chrLK032008:+:538958..540888
Molecular Weight (calculated)
40851.1 Da
IEP (calculated)
6.981
GRAVY (calculated)
-0.646
Length
376 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPSHHYHSY SSPASASFCY CSNGVADPIF SASNTSTLGE MFSLGGSNST AGVSVADPFF TLTSSGEMGR SMSGKEGAAF SEAQWQELER QRNIFKYMMA
101: SLPVPSELLS PFSRNHTNNH DVTVARGGSL KLGIASNASN NTADMEPWRC KRTDGKKWRC SRNVVPDQKY CERHAHKSRP RSRKHVETPS HSHHNDARTT
201: KNVASQFATA YPQFYGPPLS QFSAVSTLPP ASSSYDHHHS GLRWLMKEGD SIATLNPEIH EAAQLKVGSS RELKRGFEYD LNYIQNDPLV DQRFGALEEG
301: EQDEAMGSSL TLSMAGGGGM EEGEGRSQHQ WISHEGPSWL CSTTPGGPLA EALCLGVSNN PSTSTTTTSS CSRSSS
101: SLPVPSELLS PFSRNHTNNH DVTVARGGSL KLGIASNASN NTADMEPWRC KRTDGKKWRC SRNVVPDQKY CERHAHKSRP RSRKHVETPS HSHHNDARTT
201: KNVASQFATA YPQFYGPPLS QFSAVSTLPP ASSSYDHHHS GLRWLMKEGD SIATLNPEIH EAAQLKVGSS RELKRGFEYD LNYIQNDPLV DQRFGALEEG
301: EQDEAMGSSL TLSMAGGGGM EEGEGRSQHQ WISHEGPSWL CSTTPGGPLA EALCLGVSNN PSTSTTTTSS CSRSSS
001: MRMLLGIPYV DKSVLSNSVL ERGKQDKSKL LLVDKCHYEL DVEERKEDFV GGFGFGVVEN SHKDVMVLPH HHYYPSYSSP SSSSLCYCSA GVSDPMFSVS
101: SNQAYTSSHS GMFTPAGSGS AAVTVADPFF SLSSSGEMRR SMNEDAGAAF SEAQWHELER QRNIYKYMMA SVPVPPELLT PFPKNHQSNT NPDVTVAVAT
201: GGSLQLGIAS SASNNTADLE PWRCKRTDGK KWRCSRNVIP DQKYCERHTH KSRPRSRKHV ESSHQSSHHN DIRTAKNDTS QLVRTYPQFY GQPISQIPVL
301: STLPSASSPY DHHRGLRWFT KEDDAIGTLN PETQEAVQLK VGSSRELKRG FDYDLNFRQK EPIVDQSFGA LQGLLSLNQT PQHNQETRQF VVEGKQDEAM
401: GSSLTLSMAG GGMEETEGTN QHQWVSHEGP SWLYSTTPGG PLAEALCLGV SNNPSSSTTT SSCSRSSS
101: SNQAYTSSHS GMFTPAGSGS AAVTVADPFF SLSSSGEMRR SMNEDAGAAF SEAQWHELER QRNIYKYMMA SVPVPPELLT PFPKNHQSNT NPDVTVAVAT
201: GGSLQLGIAS SASNNTADLE PWRCKRTDGK KWRCSRNVIP DQKYCERHTH KSRPRSRKHV ESSHQSSHHN DIRTAKNDTS QLVRTYPQFY GQPISQIPVL
301: STLPSASSPY DHHRGLRWFT KEDDAIGTLN PETQEAVQLK VGSSRELKRG FDYDLNFRQK EPIVDQSFGA LQGLLSLNQT PQHNQETRQF VVEGKQDEAM
401: GSSLTLSMAG GGMEETEGTN QHQWVSHEGP SWLYSTTPGG PLAEALCLGV SNNPSSSTTT SSCSRSSS
Arabidopsis Description
GRF8Growth-regulating factor 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU44]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.