Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- peroxisome 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022667.1-P | Field mustard | nucleus | 99.71 | 99.71 |
| CDY51791 | Canola | nucleus | 90.2 | 95.72 |
| AT5G53660.1 | Thale cress | nucleus | 77.23 | 73.42 |
| Solyc08g068760.1.1 | Tomato | cytosol | 15.85 | 35.48 |
| CDY55116 | Canola | nucleus | 22.19 | 27.3 |
| CDX84560 | Canola | nucleus | 27.67 | 26.09 |
| CDX79674 | Canola | nucleus | 27.67 | 26.09 |
| CDX75039 | Canola | nucleus | 28.53 | 25.71 |
| CDY66422 | Canola | nucleus | 23.05 | 25.56 |
| CDY70432 | Canola | nucleus | 17.87 | 25.51 |
| CDX84126 | Canola | nucleus | 28.82 | 25.51 |
| CDY13333 | Canola | nucleus | 26.22 | 24.86 |
| CDX67545 | Canola | nucleus | 25.94 | 24.73 |
| CDY43721 | Canola | nucleus | 24.78 | 24.23 |
| CDX73595 | Canola | nucleus | 26.51 | 24.15 |
| CDX78132 | Canola | nucleus | 25.94 | 23.87 |
| PGSC0003DMT400008352 | Potato | nucleus | 30.26 | 23.39 |
| CDX83200 | Canola | nucleus | 26.51 | 23.35 |
| Solyc03g082430.1.1 | Tomato | nucleus | 29.68 | 22.49 |
| CDX75672 | Canola | nucleus | 28.82 | 22.17 |
| CDX69322 | Canola | nucleus | 29.39 | 22.13 |
| CDY10989 | Canola | nucleus | 23.34 | 21.54 |
| CDX76249 | Canola | nucleus | 25.07 | 21.27 |
| CDY03485 | Canola | nucleus | 20.75 | 20.69 |
| CDX92617 | Canola | nucleus | 23.92 | 20.39 |
| CDX72654 | Canola | nucleus | 25.65 | 20.14 |
| CDY29584 | Canola | nucleus | 23.63 | 20.1 |
| CDY72447 | Canola | nucleus, plastid | 19.6 | 19.77 |
| CDX71979 | Canola | nucleus | 21.9 | 19.74 |
| CDX82503 | Canola | nucleus | 20.75 | 19.67 |
| CDX75742 | Canola | nucleus | 20.46 | 19.45 |
| CDY39081 | Canola | nucleus | 22.19 | 19.35 |
| KRH64328 | Soybean | nucleus | 32.85 | 19.22 |
| KRH53600 | Soybean | nucleus | 31.99 | 19.2 |
| CDX97531 | Canola | nucleus | 21.04 | 18.81 |
| CDY55209 | Canola | nucleus | 21.04 | 18.72 |
| CDY33407 | Canola | nucleus | 20.75 | 18.0 |
| VIT_16s0098g01080.t01 | Wine grape | nucleus | 28.24 | 17.01 |
| CDY66284 | Canola | nucleus | 25.07 | 16.17 |
| CDY37044 | Canola | nucleus | 19.02 | 15.1 |
| CDY27382 | Canola | nucleus | 19.31 | 15.09 |
| CDY21475 | Canola | nucleus | 21.04 | 14.69 |
| CDX76250 | Canola | cytosol, golgi, mitochondrion, nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.52.1 | GO:A0A078GVZ8 | UniProt:A0A078GVZ8 | EnsemblPlants:CDY28823 | ProteinID:CDY28823 | ProteinID:CDY28823.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0032502 | InterPro:GRF | EnsemblPlantsGene:GSBRNA2T00041485001 |
| InterPro:Gln-Leu-Gln_QLQ | InterPro:IPR014977 | InterPro:IPR014978 | PFAM:PF08879 | PFAM:PF08880 | PFscan:PS51666 |
| PFscan:PS51667 | PANTHER:PTHR31602 | PANTHER:PTHR31602:SF41 | SMART:SM00951 | UniParc:UPI0004EE9C1F | InterPro:WRC_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaA02g10150DBnaA02g10150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GVZ8]
Coordinates
chrLK032226:-:487741..489084
Molecular Weight (calculated)
37984.6 Da
IEP (calculated)
8.442
GRAVY (calculated)
-0.625
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFLKVSDKT TTPYRNNSLF GLSQQHMEIH PHPHPHPHVI TPHAGNGVMG CYYYYPFTNA QLKELERQAM IYKYMIASIP VPFDLLVSSS SYAPPCNNKN
101: AVGDLEPGRC RRTDGKKWRC SKEVVSNHKY CERHLHRGRP RSRKHVELPY SRPIDIGGGS EKNRVLSSIK DTTVVEPKEV SSALANYRGL EIFPASASNE
201: QENKYLNFID VWSDGVRSSE KQSTPASSSP NGNPSLYSLD LSMGGNSLMG HDEMGLRVIG PGRDDPHGYG PYGGVVSSSL DEMSRWLAST SATPGGPLAE
301: ILRPNPSSAF SGEMEGNSLT ATPTPSSSPS RVVKKVTGSV SDDSSKI
101: AVGDLEPGRC RRTDGKKWRC SKEVVSNHKY CERHLHRGRP RSRKHVELPY SRPIDIGGGS EKNRVLSSIK DTTVVEPKEV SSALANYRGL EIFPASASNE
201: QENKYLNFID VWSDGVRSSE KQSTPASSSP NGNPSLYSLD LSMGGNSLMG HDEMGLRVIG PGRDDPHGYG PYGGVVSSSL DEMSRWLAST SATPGGPLAE
301: ILRPNPSSAF SGEMEGNSLT ATPTPSSSPS RVVKKVTGSV SDDSSKI
001: MDFLKVSDKT TIPYRSDSLF SLNQQQYKES SFGFRDMEIH PHPTPYAGNG LLGCYYYYPF TNAQLKELER QAMIYKYMIA SIPVPFDLLV SSPSSASPCN
101: NKNIAGDLEP GRCRRTDGKK WRCAKEVVSN HKYCEKHLHR GRPRSRKHVE PPYSRPNNNG GSVKNRDLKK LPQKLSSSSI KDKTLEPMEV SSSISNYRDS
201: RGSEKFTVLA TTEQENKYLN FIDVWSDGVR SSEKQSTTST PVSSSNGNLS LYSLDLSMGG NNLMGQDEMG LIQMGLGVIG SGSEDHHGYG PYGVTSSLEE
301: MSSWLAPMST TPGGPLAEIL RPSTNLAISG DIESYSLMET PTPSSSPSRV MKKMTSSVSD ESSQV
101: NKNIAGDLEP GRCRRTDGKK WRCAKEVVSN HKYCEKHLHR GRPRSRKHVE PPYSRPNNNG GSVKNRDLKK LPQKLSSSSI KDKTLEPMEV SSSISNYRDS
201: RGSEKFTVLA TTEQENKYLN FIDVWSDGVR SSEKQSTTST PVSSSNGNLS LYSLDLSMGG NNLMGQDEMG LIQMGLGVIG SGSEDHHGYG PYGVTSSLEE
301: MSSWLAPMST TPGGPLAEIL RPSTNLAISG DIESYSLMET PTPSSSPSRV MKKMTSSVSD ESSQV
Arabidopsis Description
GRF7Growth-regulating factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJB8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.