Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 61.72 | 78.93 |
| GSMUA_Achr1P23840_001 | Banana | nucleus | 57.77 | 69.36 |
| VIT_16s0039g01450.t01 | Wine grape | nucleus | 47.8 | 64.78 |
| GSMUA_AchrUn_... | Banana | nucleus | 58.7 | 61.56 |
| KRH27682 | Soybean | nucleus | 40.37 | 56.49 |
| KRH77798 | Soybean | nucleus | 40.37 | 54.72 |
| KRH23984 | Soybean | nucleus | 42.0 | 54.35 |
| KRH29333 | Soybean | nucleus | 42.23 | 53.37 |
| PGSC0003DMT400079338 | Potato | nucleus | 38.75 | 52.52 |
| PGSC0003DMT400047580 | Potato | nucleus | 42.92 | 52.41 |
| Solyc08g005430.2.1 | Tomato | nucleus | 42.92 | 51.97 |
| Solyc12g096070.1.1 | Tomato | nucleus | 41.53 | 51.88 |
| PGSC0003DMT400075563 | Potato | nucleus | 41.76 | 51.43 |
| Solyc08g075950.1.1 | Tomato | nucleus | 42.92 | 51.25 |
| GSMUA_Achr6P01270_001 | Banana | nucleus | 38.52 | 49.4 |
| GSMUA_Achr5P20170_001 | Banana | extracellular | 17.4 | 43.86 |
| GSMUA_Achr8P12060_001 | Banana | extracellular | 17.63 | 37.62 |
| GSMUA_Achr11P... | Banana | mitochondrion, plasma membrane | 17.63 | 37.07 |
| GSMUA_Achr4P32310_001 | Banana | nucleus | 11.83 | 35.17 |
| GSMUA_Achr8P30640_001 | Banana | nucleus | 24.59 | 33.12 |
| GSMUA_Achr7P02330_001 | Banana | nucleus | 24.59 | 30.81 |
| GSMUA_Achr1P21940_001 | Banana | nucleus | 26.22 | 29.82 |
| GSMUA_Achr8P07650_001 | Banana | extracellular | 19.03 | 25.95 |
| GSMUA_Achr3P22790_001 | Banana | nucleus | 22.74 | 25.0 |
| GSMUA_Achr1P27000_001 | Banana | nucleus | 23.67 | 24.06 |
| GSMUA_AchrUn_... | Banana | nucleus | 16.24 | 20.53 |
| GSMUA_Achr8P04970_001 | Banana | nucleus | 26.45 | 19.62 |
| GSMUA_Achr3P15140_001 | Banana | nucleus | 20.65 | 18.24 |
| GSMUA_Achr7P27480_001 | Banana | nucleus | 25.52 | 18.12 |
| GSMUA_Achr8P26530_001 | Banana | nucleus | 25.29 | 7.6 |
Protein Annotations
| MapMan:15.5.52.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0032502 | InterPro:GRF |
| EnsemblPlantsGene:GSMUA_Achr2G04650_001 | EnsemblPlants:GSMUA_Achr2P04650_001 | EnsemblPlants:GSMUA_Achr2T04650_001 | InterPro:Gln-Leu-Gln_QLQ | InterPro:IPR014977 | InterPro:IPR014978 |
| UniProt:M0S556 | PFAM:PF08879 | PFAM:PF08880 | PFscan:PS51666 | PFscan:PS51667 | PANTHER:PTHR31602 |
| PANTHER:PTHR31602:SF8 | SMART:SM00951 | UniParc:UPI00029623A7 | InterPro:WRC_dom | SEG:seg | : |
Description
growth-regulating factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G04650_001]
Coordinates
chr2:+:9999963..10005052
Molecular Weight (calculated)
47244.1 Da
IEP (calculated)
8.042
GRAVY (calculated)
-0.563
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MISFPHTLSN VQNSACVFIT PVVSMKEIGL VKIYHGSTSV QVKSDSEDEQ HGGGGGGGGW GGRPPFTAAQ WQELEHQALI YKYLTAGVPV PPELLIPIRR
101: SFEALPGRYY HHPALAYCSY YGKKLDPEPG RCRRTDGKKW RCSKDAHPDS KYCERHMHRG RNRSRKPVES QSISQLQSAS STTTSLTPTG SSGSVSSGGG
201: LQSIPQYSVA GHSGRQSLCL GASSSLHLPM DPGPYGNSHS GYARLRFFDA LYALISCLLL LSVVIHSTGT CRYFSGVKPG VDEQSFFSEA SGSARGLGMD
301: PVDSSWHLMP SRVSLFPSSK ARDPSPLQSA YTQLQSVQDL GHVTISSMSR QPEQQQHSFI GGEFNSPESV KQESQFLRPF FDEWPKTRDS WSDMEEDRSN
401: RTSYSTTQLS ISFPMSSSDF STTSSKSPND D
101: SFEALPGRYY HHPALAYCSY YGKKLDPEPG RCRRTDGKKW RCSKDAHPDS KYCERHMHRG RNRSRKPVES QSISQLQSAS STTTSLTPTG SSGSVSSGGG
201: LQSIPQYSVA GHSGRQSLCL GASSSLHLPM DPGPYGNSHS GYARLRFFDA LYALISCLLL LSVVIHSTGT CRYFSGVKPG VDEQSFFSEA SGSARGLGMD
301: PVDSSWHLMP SRVSLFPSSK ARDPSPLQSA YTQLQSVQDL GHVTISSMSR QPEQQQHSFI GGEFNSPESV KQESQFLRPF FDEWPKTRDS WSDMEEDRSN
401: RTSYSTTQLS ISFPMSSSDF STTSSKSPND D
001: MMSLSGSSGR TIGRPPFTPT QWEELEHQAL IYKYMVSGVP VPPELIFSIR RSLDTSLVSR LLPHQSLGWG CYQMGFGRKP DPEPGRCRRT DGKKWRCSRE
101: AYPDSKYCEK HMHRGRNRAR KSLDQNQTTT TPLTSPSLSF TNNNNPSPTL SSSSSSNSSS TTYSASSSSM DAYSNSNRFG LGGSSSNTRG YFNSHSLDYP
201: YPSTSPKQQQ QTLHHASALS LHQNTNSTSQ FNVLASATDH KDFRYFQGIG ERVGGVGERT FFPEASRSFQ DSPYHHHQQP LATVMNDPYH HCSTDHNKID
301: HHHTYSSSSS SQHLHHDHDH RQQQCFVLGA DMFNKPTRSV LANSSRQDQN QEEDEKDSSE SSKKSLHHFF GEDWAQNKNS SDSWLDLSSH SRLDTGS
101: AYPDSKYCEK HMHRGRNRAR KSLDQNQTTT TPLTSPSLSF TNNNNPSPTL SSSSSSNSSS TTYSASSSSM DAYSNSNRFG LGGSSSNTRG YFNSHSLDYP
201: YPSTSPKQQQ QTLHHASALS LHQNTNSTSQ FNVLASATDH KDFRYFQGIG ERVGGVGERT FFPEASRSFQ DSPYHHHQQP LATVMNDPYH HCSTDHNKID
301: HHHTYSSSSS SQHLHHDHDH RQQQCFVLGA DMFNKPTRSV LANSSRQDQN QEEDEKDSSE SSKKSLHHFF GEDWAQNKNS SDSWLDLSSH SRLDTGS
Arabidopsis Description
GRF5Growth-regulating factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8A6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.