Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH77798 | Soybean | nucleus | 94.81 | 91.82 |
| KRH29333 | Soybean | nucleus | 76.95 | 69.5 |
| KRH23984 | Soybean | nucleus | 75.0 | 69.37 |
| VIT_16s0039g01450.t01 | Wine grape | nucleus | 70.78 | 68.55 |
| GSMUA_Achr10P... | Banana | nucleus | 54.55 | 49.85 |
| PGSC0003DMT400079338 | Potato | nucleus | 50.97 | 49.37 |
| PGSC0003DMT400047580 | Potato | nucleus | 55.19 | 48.16 |
| Solyc08g005430.2.1 | Tomato | nucleus | 54.87 | 47.47 |
| Solyc12g096070.1.1 | Tomato | nucleus | 52.6 | 46.96 |
| PGSC0003DMT400075563 | Potato | nucleus | 52.6 | 46.29 |
| Solyc08g075950.1.1 | Tomato | nucleus | 53.9 | 45.98 |
| GSMUA_Achr1P23840_001 | Banana | nucleus | 52.6 | 45.13 |
| GSMUA_AchrUn_... | Banana | nucleus | 54.55 | 40.88 |
| GSMUA_Achr2P04650_001 | Banana | extracellular | 56.49 | 40.37 |
| KRH12524 | Soybean | nucleus | 41.23 | 34.79 |
| KRH37478 | Soybean | nucleus | 40.58 | 34.25 |
| KRH19281 | Soybean | nucleus | 41.23 | 33.07 |
| KRH02627 | Soybean | nucleus | 39.94 | 32.63 |
| KRH47599 | Soybean | nucleus | 36.04 | 32.17 |
| KRH06183 | Soybean | nucleus | 36.04 | 30.83 |
| KRH76368 | Soybean | nucleus | 28.9 | 26.57 |
| KRH30830 | Soybean | nucleus | 28.57 | 26.27 |
| KRH39656 | Soybean | nucleus, plastid | 28.57 | 26.11 |
| KRH32671 | Soybean | nucleus | 27.6 | 25.3 |
| KRH67865 | Soybean | nucleus | 29.87 | 23.96 |
| KRG96154 | Soybean | nucleus | 28.9 | 22.94 |
| KRG88739 | Soybean | nucleus | 35.71 | 18.52 |
| KRH05542 | Soybean | nucleus | 35.06 | 18.0 |
| KRG88736 | Soybean | nucleus | 34.09 | 17.53 |
| KRH05543 | Soybean | nucleus | 34.42 | 17.41 |
| KRH76298 | Soybean | nucleus | 24.35 | 16.38 |
| KRH65240 | Soybean | nucleus | 23.05 | 15.17 |
| KRH64328 | Soybean | nucleus | 28.9 | 15.01 |
| KRH53600 | Soybean | nucleus | 27.27 | 14.53 |
Protein Annotations
| EntrezGene:100817313 | MapMan:15.5.52.1 | EMBL:ACUP02006731 | EnsemblPlantsGene:GLYMA_11G008500 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0032502 | InterPro:GRF | InterPro:Gln-Leu-Gln_QLQ | UniProt:I1LFW5 | InterPro:IPR014977 |
| InterPro:IPR014978 | EnsemblPlants:KRH27682 | ProteinID:KRH27682 | ProteinID:KRH27682.1 | PFAM:PF08879 | PFAM:PF08880 |
| PFscan:PS51666 | PFscan:PS51667 | PANTHER:PTHR31602 | PANTHER:PTHR31602:SF8 | SMART:SM00951 | UniParc:UPI000233C24A |
| InterPro:WRC_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr11:+:582826..586654
Molecular Weight (calculated)
34585.0 Da
IEP (calculated)
8.035
GRAVY (calculated)
-0.806
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKWPFTISQ WQELEHQALI YKYMVAGLPV PPDLVIPIQN SFHSISQTFL HHPSTTMSYC SFYGKKVDPE PGRCRRTDGK KWRCSKEAYP DSKYCERHMH
101: RGRNRSRKPV ESQTMTQSSS NVSSLTVTAG SSTSATGNFQ NLSTTNAYGN PQGTASGTDQ THYHMDSIPY GIPSKEYRYF QGSKSEEHSF LSKTLGSNRV
201: LHMEPQMDNT LMPTGGVASF STLRSNNNSM LQGDYLQPSF LSSEYASAET VKQEGQSLRP FFDEWPKSRD SWSGLEDERS NHTQLSISIP MSSSNFSATS
301: SHSPHGEI
101: RGRNRSRKPV ESQTMTQSSS NVSSLTVTAG SSTSATGNFQ NLSTTNAYGN PQGTASGTDQ THYHMDSIPY GIPSKEYRYF QGSKSEEHSF LSKTLGSNRV
201: LHMEPQMDNT LMPTGGVASF STLRSNNNSM LQGDYLQPSF LSSEYASAET VKQEGQSLRP FFDEWPKSRD SWSGLEDERS NHTQLSISIP MSSSNFSATS
301: SHSPHGEI
001: MMSLSGSSGR TIGRPPFTPT QWEELEHQAL IYKYMVSGVP VPPELIFSIR RSLDTSLVSR LLPHQSLGWG CYQMGFGRKP DPEPGRCRRT DGKKWRCSRE
101: AYPDSKYCEK HMHRGRNRAR KSLDQNQTTT TPLTSPSLSF TNNNNPSPTL SSSSSSNSSS TTYSASSSSM DAYSNSNRFG LGGSSSNTRG YFNSHSLDYP
201: YPSTSPKQQQ QTLHHASALS LHQNTNSTSQ FNVLASATDH KDFRYFQGIG ERVGGVGERT FFPEASRSFQ DSPYHHHQQP LATVMNDPYH HCSTDHNKID
301: HHHTYSSSSS SQHLHHDHDH RQQQCFVLGA DMFNKPTRSV LANSSRQDQN QEEDEKDSSE SSKKSLHHFF GEDWAQNKNS SDSWLDLSSH SRLDTGS
101: AYPDSKYCEK HMHRGRNRAR KSLDQNQTTT TPLTSPSLSF TNNNNPSPTL SSSSSSNSSS TTYSASSSSM DAYSNSNRFG LGGSSSNTRG YFNSHSLDYP
201: YPSTSPKQQQ QTLHHASALS LHQNTNSTSQ FNVLASATDH KDFRYFQGIG ERVGGVGERT FFPEASRSFQ DSPYHHHQQP LATVMNDPYH HCSTDHNKID
301: HHHTYSSSSS SQHLHHDHDH RQQQCFVLGA DMFNKPTRSV LANSSRQDQN QEEDEKDSSE SSKKSLHHFF GEDWAQNKNS SDSWLDLSSH SRLDTGS
Arabidopsis Description
GRF5Growth-regulating factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8A6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.