CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39656	Soybean	nucleus, plastid	93.73	93.18
KRH27682	Soybean	nucleus	26.57	28.9
KRH77798	Soybean	nucleus	26.87	28.3
KRH23984	Soybean	nucleus	27.76	27.93
KRH29333	Soybean	nucleus	27.16	26.69
KRH47599	Soybean	nucleus	25.67	24.93
KRH06183	Soybean	nucleus	25.07	23.33
KRH30830	Soybean	nucleus	22.69	22.69
KRH32671	Soybean	nucleus	21.79	21.73
KRH12524	Soybean	nucleus	23.28	21.37
KRH37478	Soybean	nucleus	22.99	21.1
KRH19281	Soybean	nucleus	23.88	20.83
KRH02627	Soybean	nucleus	22.99	20.42
KRH67865	Soybean	nucleus	22.99	20.05
KRG96154	Soybean	nucleus	22.69	19.59
KRG88736	Soybean	nucleus	27.46	15.36
KRG88739	Soybean	nucleus	27.16	15.32
KRH05542	Soybean	nucleus	26.27	14.67
KRH05543	Soybean	nucleus	26.57	14.61
KRH76298	Soybean	nucleus	18.51	13.54
KRH64328	Soybean	nucleus	23.58	13.32
KRH53600	Soybean	nucleus	22.99	13.32
KRH65240	Soybean	nucleus	17.91	12.82

Protein Annotations

EntrezGene:100809947	MapMan:15.5.52.1	EMBL:ACUP02000608	EnsemblPlantsGene:GLYMA_01G148600	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0032502	InterPro:GRF	InterPro:Gln-Leu-Gln_QLQ	InterPro:IPR014977	InterPro:IPR014978
UniProt:K7K3Y3	EnsemblPlants:KRH76368	ProteinID:KRH76368	ProteinID:KRH76368.1	PFAM:PF08879	PFAM:PF08880
PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF2	SMART:SM00951	UniParc:UPI00023371B1
InterPro:WRC_dom	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:48570390..48574342

Molecular Weight (calculated)

36938.1 Da

IEP (calculated)

9.284

GRAVY (calculated)

-0.687

Length

335 amino acids

Sequence
(BLAST)

001: MSVPPPYAAA MWTPFTAAQW HELEHQALIF KYLKAGLSVP PDLLLPIRKS LQLMSHPSLG FYGKKIDPEP GRCRRTDGKK WRCSRDAHPD SKYCDRHMIR
101: RRYRSRKPVE SSQTHSSSSS SSSSSATAAS SNSNPVAGGG GGSVANVSGT ATAAKTLHTL PLHTNGAREG FTFTLGNNTN TTLPHLHMNP LTLSADNTKK
201: TYRFGLNSEA DEHNVLQKDL GSVRYQGYDF TSDAMWSQMS HIPSNTVSES RSGSTMLGNC FQHQTMRDAE LLNLETARTK DLVFSGQLSS AGGLKQEYQS
301: PQSLFSDWDW KKDLSSSALE YKPNKDFNCN PDANV

Best Arabidopsis Sequence Match ( AT3G13960.1 )
(BLAST)

001: MMSLSGSSGR TIGRPPFTPT QWEELEHQAL IYKYMVSGVP VPPELIFSIR RSLDTSLVSR LLPHQSLGWG CYQMGFGRKP DPEPGRCRRT DGKKWRCSRE
101: AYPDSKYCEK HMHRGRNRAR KSLDQNQTTT TPLTSPSLSF TNNNNPSPTL SSSSSSNSSS TTYSASSSSM DAYSNSNRFG LGGSSSNTRG YFNSHSLDYP
201: YPSTSPKQQQ QTLHHASALS LHQNTNSTSQ FNVLASATDH KDFRYFQGIG ERVGGVGERT FFPEASRSFQ DSPYHHHQQP LATVMNDPYH HCSTDHNKID
301: HHHTYSSSSS SQHLHHDHDH RQQQCFVLGA DMFNKPTRSV LANSSRQDQN QEEDEKDSSE SSKKSLHHFF GEDWAQNKNS SDSWLDLSSH SRLDTGS

Arabidopsis Description

GRF5Growth-regulating factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8A6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.