CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76368	Soybean	nucleus	93.18	93.73
KRH27682	Soybean	nucleus	26.11	28.57
KRH77798	Soybean	nucleus	26.41	27.99
KRH23984	Soybean	nucleus	27.0	27.33
KRH29333	Soybean	nucleus	26.41	26.1
KRH47599	Soybean	nucleus	25.82	25.22
KRH06183	Soybean	nucleus	25.22	23.61
KRH30830	Soybean	nucleus	21.96	22.09
KRH12524	Soybean	nucleus	23.15	21.37
KRH32671	Soybean	nucleus	21.07	21.13
KRH37478	Soybean	nucleus	22.85	21.1
KRH19281	Soybean	nucleus	24.04	21.09
KRH02627	Soybean	nucleus	23.15	20.69
KRH67865	Soybean	nucleus	22.26	19.53
KRG96154	Soybean	nucleus	21.96	19.07
KRG88736	Soybean	nucleus	26.41	14.86
KRG88739	Soybean	nucleus	25.82	14.65
KRH05542	Soybean	nucleus	25.22	14.17
KRH05543	Soybean	nucleus	25.52	14.12
KRH64328	Soybean	nucleus	24.04	13.66
KRH53600	Soybean	nucleus	22.85	13.32
KRH76298	Soybean	nucleus	18.1	13.32
KRH65240	Soybean	nucleus	17.51	12.61

Protein Annotations

EntrezGene:100777524	MapMan:15.5.52.1	EMBL:ACUP02005951	EnsemblPlantsGene:GLYMA_09G212500	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0032502	InterPro:GRF	InterPro:Gln-Leu-Gln_QLQ	InterPro:IPR014977	InterPro:IPR014978
UniProt:K7LF72	EnsemblPlants:KRH39656	ProteinID:KRH39656	ProteinID:KRH39656.1	PFAM:PF08879	PFAM:PF08880
PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF2	SMART:SM00951	UniParc:UPI0002337FE1
InterPro:WRC_dom	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:43639978..43643164

Molecular Weight (calculated)

37344.6 Da

IEP (calculated)

9.102

GRAVY (calculated)

-0.707

Length

337 amino acids

Sequence
(BLAST)

001: MSVPPPSTAA MWTPFTAAQW HELEHQALIF KYLKAGLSVP PDLLLPIRKS LQLISSHPSM GYYGKKIDPE PGRCRRTDGK KWRCSRDAHP DSKYCDRHMI
101: RRRYRSRKPV ESSQTHSSSS ASAASSNSNP VAAGGGGGSV ANVSATAAKN LHTLPLHING AREGFTFTLG NNTSTNTNTN TNTLPHLHMN PLTLSADNTK
201: KTYRFGLNSE ADEHNVLQKD LGSVRYQGYD FTSDAMWSQM SHIPSNTVSE SRIGSTMLGN CFQHQTMRDA ELLNLETART KDLVFSGQLS SAGGMKQEYQ
301: SPQSLFSDWD WKKDLSSSAL EYRPNKDFNC NPDVNVD

Best Arabidopsis Sequence Match ( AT4G37740.1 )
(BLAST)

001: MDIGVHVLGS VTSNENESLG LKELIGTKQD RSGFIGEDCL QRSLKLARTT TRAEEEENLS SSVAAAYCKT MSFHQGIPLM RSASPLSSDS RRQEQMLSFS
101: DKPDALDFSK YVGLDNSSNN KNSLSPFLHQ IPPPSYFRSS GGYGSGGMMM NMSMQGNFTG VKGPFTLTQW AELEQQALIY KYITANVPVP SSLLISIKKS
201: FYPYGSLPPS SFGWGTFHLG FAGGNMDPEP GRCRRTDGKK WRCSRDAVPD QKYCERHINR GRHRSRKPVE VQSGQNQTAA AASKAVTTPQ QPVVAGNTNR
301: SNARASSNRS LAIGSQYINP STESLPNNRG VSIYPSTVNL QPKESPVIHQ KHRNNNNPFE FGHISSDSLL NPNTAKTYGS SFLDFSSNQE KHSGNHNHNS
401: WPEELTSDWT QLSMSIPIAS SSPSSTHNNN NAQEKTTLSP LRLSRELDLS IQTDETTIEP TVKKVNTWIP ISWGNSLGGP LGEVLNSTTN SPTFGSSPTG
501: VLQKSTFCSL SNNSSVSSPI AENNRHNGDY FHYTT

Arabidopsis Description

GRF2GRF2 [Source:UniProtKB/TrEMBL;Acc:A0A178UXW8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.