Factsheet for Zm00001d014421_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion
MultiLoc:	extracellular
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005387_P001	Maize	nucleus	55.1	87.1
Zm00001d042010_P001	Maize	nucleus	57.14	81.16
Zm00001d051456_P001	Maize	nucleus	32.65	14.48
GSMUA_Achr6P01270_001	Banana	nucleus	43.88	12.8
Zm00001d002429_P003	Maize	nucleus	43.88	11.98
Zm00001d021362_P001	Maize	extracellular, nucleus	31.63	11.52
Zm00001d045533_P001	Maize	nucleus	42.86	11.48
Zm00001d006348_P001	Maize	nucleus	31.63	11.36
Zm00001d035965_P004	Maize	nucleus	42.86	11.02
Zm00001d026240_P006	Maize	plastid	43.88	10.83
Zm00001d006338_P002	Maize	mitochondrion	30.61	10.79
Zm00001d017742_P001	Maize	plastid	42.86	10.29
Zm00001d037117_P001	Maize	mitochondrion, nucleus	37.76	10.05
Zm00001d007465_P001	Maize	nucleus	31.63	9.94
Zm00001d018260_P001	Maize	mitochondrion	37.76	9.84
Zm00001d000238_P001	Maize	nucleus	37.76	9.44
Zm00001d052112_P001	Maize	mitochondrion, nucleus	37.76	9.23
HORVU0Hr1G026650.1	Barley	mitochondrion, nucleus	10.2	8.77
KRH76298	Soybean	nucleus	35.71	7.64
KRH65240	Soybean	nucleus	35.71	7.48
Zm00001d013555_P001	Maize	nucleus	32.65	7.34
Zm00001d033396_P003	Maize	nucleus	32.65	7.31
Zm00001d013346_P001	Maize	nucleus	31.63	5.3
Zm00001d033876_P004	Maize	nucleus	31.63	5.23
Zm00001d002049_P001	Maize	cytosol, plastid	1.02	1.02
CDX76250	Canola	cytosol, golgi, mitochondrion, nucleus	0.0	0.0

Protein Annotations

MapMan:15.5.52.1	UniProt:A0A1D6GT35	ProteinID:AQK66173.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0032502	InterPro:GRF	InterPro:IPR014977	PFAM:PF08879	PFscan:PS51667
PANTHER:PTHR31602	PANTHER:PTHR31602:SF8	UniParc:UPI000842CF78	InterPro:WRC_dom	EnsemblPlantsGene:Zm00001d014421	EnsemblPlants:Zm00001d014421_P001
EnsemblPlants:Zm00001d014421_T001	SEG:seg	:	:	:	:

Description

Growth-regulating factor 6

Coordinates

chr5:-:45945830..45947982

Molecular Weight (calculated)

11517.0 Da

IEP (calculated)

11.178

GRAVY (calculated)

-1.135

Length

98 amino acids

Sequence
(BLAST)

1: MVWAHMWIGG AQTGMEGMRG GIWKGRARME GRRGRRMTVG FAVGYEPYFG KTVYPEPERC RRTDDKKWRC SNEAAPVSKY CERQMHRGHN RSRKHVKK

Best Arabidopsis Sequence Match ( AT3G13960.1 )
(BLAST)

001: MMSLSGSSGR TIGRPPFTPT QWEELEHQAL IYKYMVSGVP VPPELIFSIR RSLDTSLVSR LLPHQSLGWG CYQMGFGRKP DPEPGRCRRT DGKKWRCSRE
101: AYPDSKYCEK HMHRGRNRAR KSLDQNQTTT TPLTSPSLSF TNNNNPSPTL SSSSSSNSSS TTYSASSSSM DAYSNSNRFG LGGSSSNTRG YFNSHSLDYP
201: YPSTSPKQQQ QTLHHASALS LHQNTNSTSQ FNVLASATDH KDFRYFQGIG ERVGGVGERT FFPEASRSFQ DSPYHHHQQP LATVMNDPYH HCSTDHNKID
301: HHHTYSSSSS SQHLHHDHDH RQQQCFVLGA DMFNKPTRSV LANSSRQDQN QEEDEKDSSE SSKKSLHHFF GEDWAQNKNS SDSWLDLSSH SRLDTGS

Arabidopsis Description

GRF5Growth-regulating factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8A6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.