Factsheet for Zm00001d045533_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89089	Sorghum	cytosol, mitochondrion, nucleus	79.51	91.22
Zm00001d035965_P004	Maize	nucleus	82.79	79.53
TraesCS7A01G049100.1	Wheat	nucleus	75.41	74.59
TraesCS7D01G044200.1	Wheat	nucleus	74.86	74.46
TraesCS4A01G434900.1	Wheat	nucleus	74.59	73.58
HORVU7Hr1G008680.11	Barley	cytosol, mitochondrion, nucleus, vacuole	73.5	67.42
Zm00001d005387_P001	Maize	nucleus	10.38	61.29
Zm00001d042010_P001	Maize	nucleus	10.93	57.97
Zm00001d014421_P001	Maize	cytosol	11.48	42.86
Zm00001d002429_P003	Maize	nucleus	40.44	41.23
Zm00001d026240_P006	Maize	plastid	40.98	37.78
Zm00001d017742_P001	Maize	plastid	38.8	34.8
Zm00001d037117_P001	Maize	mitochondrion, nucleus	30.33	30.16
Zm00001d018260_P001	Maize	mitochondrion	30.33	29.52
Zm00001d000238_P001	Maize	nucleus	30.87	28.83
Zm00001d052112_P001	Maize	mitochondrion, nucleus	31.15	28.43
Zm00001d051456_P001	Maize	nucleus	16.67	27.6
Zm00001d006338_P002	Maize	mitochondrion	16.67	21.94
Zm00001d006348_P001	Maize	nucleus	15.57	20.88
Zm00001d021362_P001	Maize	extracellular, nucleus	15.03	20.45
Zm00001d007465_P001	Maize	nucleus	17.21	20.19
Zm00001d033396_P003	Maize	nucleus	23.77	19.86
Zm00001d013555_P001	Maize	nucleus	22.4	18.81
Zm00001d013346_P001	Maize	nucleus	26.5	16.58
Zm00001d033876_P004	Maize	nucleus	25.96	16.02
Zm00001d002049_P001	Maize	cytosol, plastid	2.46	9.18

Protein Annotations

MapMan:15.5.52.1	ProteinID:AQL02487.1	UniProt:B7ZZU2	EMBL:BT054834	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0032502	InterPro:GRF	InterPro:Gln-Leu-Gln_QLQ	InterPro:IPR014977	InterPro:IPR014978
PFAM:PF08879	PFAM:PF08880	PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF7
SMART:SM00951	UniParc:UPI0001917506	InterPro:WRC_dom	EnsemblPlantsGene:Zm00001d045533	EnsemblPlants:Zm00001d045533_P001	EnsemblPlants:Zm00001d045533_T001
SEG:seg	:	:	:	:	:

Description

Growth-regulating factor 6

Coordinates

chr9:+:25739313..25742304

Molecular Weight (calculated)

39149.5 Da

IEP (calculated)

9.217

GRAVY (calculated)

-0.555

Length

366 amino acids

Sequence
(BLAST)

001: MLSSASSAGA AMGMGGGYQH QPLPLPQRGA AAAVFTAAQW AELEQQALIY KYLMAGVPVP PDLLRPAPHA AAFSFASPAA SPFYHHHHHH PSLSYYAYYG
101: KKLDPEPWRC RRTDGKKWRC SKEAHPDSKY CERHMHRGRN RSRKPVESKT ASSPPQLSTV VTTTTTREAA AATPLESLAG AGGKAHGLSL GGGAGSSHLS
201: VDASNAHFRY GSKYPLGAKS DAGELSFFSG APGNSRGFTI DSPADNSWHS LPSNVPPFTL SKGRDSGLLP GAYSYSHIEP PQVLGQVTIA SLSQDQERHQ
301: SSFSSGGAGA GGLLGSVKQE NQPLRPFFDE WPGTRDSWSE MDDARSSRTS FSTTQLSISI PMPRCD

Best Arabidopsis Sequence Match ( AT3G13960.1 )
(BLAST)

001: MMSLSGSSGR TIGRPPFTPT QWEELEHQAL IYKYMVSGVP VPPELIFSIR RSLDTSLVSR LLPHQSLGWG CYQMGFGRKP DPEPGRCRRT DGKKWRCSRE
101: AYPDSKYCEK HMHRGRNRAR KSLDQNQTTT TPLTSPSLSF TNNNNPSPTL SSSSSSNSSS TTYSASSSSM DAYSNSNRFG LGGSSSNTRG YFNSHSLDYP
201: YPSTSPKQQQ QTLHHASALS LHQNTNSTSQ FNVLASATDH KDFRYFQGIG ERVGGVGERT FFPEASRSFQ DSPYHHHQQP LATVMNDPYH HCSTDHNKID
301: HHHTYSSSSS SQHLHHDHDH RQQQCFVLGA DMFNKPTRSV LANSSRQDQN QEEDEKDSSE SSKKSLHHFF GEDWAQNKNS SDSWLDLSSH SRLDTGS

Arabidopsis Description

GRF5Growth-regulating factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8A6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.