Factsheet for TraesCS7D01G044200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G049100.1	Wheat	nucleus	98.1	97.57
TraesCS4A01G434900.1	Wheat	nucleus	97.55	96.77
HORVU7Hr1G008680.11	Barley	cytosol, mitochondrion, nucleus, vacuole	94.29	86.97
EER89089	Sorghum	cytosol, mitochondrion, nucleus	67.66	78.06
Zm00001d045533_P001	Maize	nucleus	74.46	74.86
Zm00001d035965_P004	Maize	nucleus	72.55	70.08
TraesCS2D01G435200.1	Wheat	nucleus, plastid	38.59	36.32
TraesCS6D01G245300.1	Wheat	plastid	37.23	33.5
TraesCS7D01G166400.1	Wheat	nucleus	28.26	32.5
TraesCS6D01G238900.1	Wheat	nucleus	18.48	31.63
TraesCS2D01G395900.1	Wheat	nucleus	17.93	28.82
TraesCS6D01G315700.1	Wheat	nucleus	31.79	28.26
TraesCS2D01G246600.1	Wheat	nucleus	15.76	21.97
TraesCS4D01G020300.1	Wheat	nucleus	23.1	20.48
TraesCS6D01G163900.1	Wheat	plastid	12.5	18.62
TraesCS4D01G059600.1	Wheat	nucleus	27.45	17.47

Protein Annotations

MapMan:15.5.52.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0032502	InterPro:GRF
InterPro:Gln-Leu-Gln_QLQ	InterPro:IPR014977	InterPro:IPR014978	PFAM:PF08879	PFAM:PF08880	PFscan:PS51666
PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF7	SMART:SM00951	EnsemblPlantsGene:TraesCS7D01G044200	EnsemblPlants:TraesCS7D01G044200.1
InterPro:WRC_dom	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:22586526..22589173

Molecular Weight (calculated)

39897.5 Da

IEP (calculated)

8.574

GRAVY (calculated)

-0.750

Length

368 amino acids

Sequence
(BLAST)

001: MLSSSAAMGM GLGGYGQQQQ QQMQMQMQRG AEPVFTPAQW AELEQQALIY KYLMAGVPVP PDLLLPIRPH PAGAAGTTFS FANPAASPFY HHHHPSMSYY
101: AYYGKKLDPE PWRCRRTDGK KWRCSKEAHP DSKYCERHMH RGRNRSRKPV ESKSASPAHQ SQQPQLSAVT SAARDAEPLP SLPAGAKTHG LSLGGAGSSQ
201: MHVDASSYGG KYSLGAKSDV GELSFFSGAS GNNNRGFTID SPTDSSWHSM GSSLTPYQLS KPRDSGLMQG GFSYSHFEPS QELGQVTIAS LSHSQEQDRR
301: SFGGGGGGGG GGAGLMGNVK QENQPLRPFF DEWPGRRDSW SEMDDERSNG TSFSTTQLSI SIPMPRCD

Best Arabidopsis Sequence Match ( AT3G13960.1 )
(BLAST)

001: MMSLSGSSGR TIGRPPFTPT QWEELEHQAL IYKYMVSGVP VPPELIFSIR RSLDTSLVSR LLPHQSLGWG CYQMGFGRKP DPEPGRCRRT DGKKWRCSRE
101: AYPDSKYCEK HMHRGRNRAR KSLDQNQTTT TPLTSPSLSF TNNNNPSPTL SSSSSSNSSS TTYSASSSSM DAYSNSNRFG LGGSSSNTRG YFNSHSLDYP
201: YPSTSPKQQQ QTLHHASALS LHQNTNSTSQ FNVLASATDH KDFRYFQGIG ERVGGVGERT FFPEASRSFQ DSPYHHHQQP LATVMNDPYH HCSTDHNKID
301: HHHTYSSSSS SQHLHHDHDH RQQQCFVLGA DMFNKPTRSV LANSSRQDQN QEEDEKDSSE SSKKSLHHFF GEDWAQNKNS SDSWLDLSSH SRLDTGS

Arabidopsis Description

GRF5Growth-regulating factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8A6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.