Factsheet for TraesCS2D01G435200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 5
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G435100.1	Wheat	nucleus	92.58	94.27
TraesCS2B01G458400.1	Wheat	nucleus, plastid	92.84	93.8
Os04t0600900-02	Rice	plastid	70.84	72.14
TraesCS6D01G245300.1	Wheat	plastid	57.8	55.26
Zm00001d017742_P001	Maize	plastid	57.29	54.9
OQU85555	Sorghum	plastid	57.54	51.49
TraesCS7D01G044200.1	Wheat	nucleus	36.32	38.59
TraesCS6D01G238900.1	Wheat	nucleus	18.93	34.42
TraesCS7D01G166400.1	Wheat	nucleus	26.34	32.19
TraesCS2D01G395900.1	Wheat	nucleus	18.16	31.0
TraesCS6D01G315700.1	Wheat	nucleus	32.48	30.68
TraesCS2D01G246600.1	Wheat	nucleus	15.6	23.11
TraesCS4D01G020300.1	Wheat	nucleus	20.2	19.04
TraesCS6D01G163900.1	Wheat	plastid	11.76	18.62
TraesCS4D01G059600.1	Wheat	nucleus	25.32	17.13

Protein Annotations

MapMan:15.5.52.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0032502	InterPro:GRF
InterPro:Gln-Leu-Gln_QLQ	InterPro:IPR014977	InterPro:IPR014978	PFAM:PF08879	PFAM:PF08880	PFscan:PS51666
PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF21	SMART:SM00951	EnsemblPlantsGene:TraesCS2D01G435200	EnsemblPlants:TraesCS2D01G435200.1
InterPro:WRC_dom	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:546208321..546212228

Molecular Weight (calculated)

42782.5 Da

IEP (calculated)

7.535

GRAVY (calculated)

-0.620

Length

391 amino acids

Sequence
(BLAST)

001: MAMPFASLSP AADHHRSSPI FPFCRSSPLY SAGEEAAQQQ QQHAMSGARW AAMRPATFTA AQYQELEQQA LIYKYLVAGV PVPPDLLLPI RRDFDSLASR
101: FYHHHALGYG SYFGKKLDPE PGRCRRTDGK KWRCSKEAAQ DSKYCERHMH RGRNRSRKPV ETQLVATPHS HSHSQQLQQH APAATAAAFH SHSPYPAIAT
201: GGGGGAAGSF GLGSAQLHMD NAAAPYATAG AAGNKDFRYS AYGFRTSALE EHNQFISAAM DTAMDNYSWR LMPAQNSAFS LSSYPMLGTL GDLDQSAICS
301: LAKTEREPLS FGGGGGFEDD ESAVKQENQT LRPFFDEWPK DRDSWPELQD HDSNHNSNAF SATKLSISIP VTSSDFSTTA GSRSPHGIYS R

Best Arabidopsis Sequence Match ( AT3G13960.1 )
(BLAST)

001: MMSLSGSSGR TIGRPPFTPT QWEELEHQAL IYKYMVSGVP VPPELIFSIR RSLDTSLVSR LLPHQSLGWG CYQMGFGRKP DPEPGRCRRT DGKKWRCSRE
101: AYPDSKYCEK HMHRGRNRAR KSLDQNQTTT TPLTSPSLSF TNNNNPSPTL SSSSSSNSSS TTYSASSSSM DAYSNSNRFG LGGSSSNTRG YFNSHSLDYP
201: YPSTSPKQQQ QTLHHASALS LHQNTNSTSQ FNVLASATDH KDFRYFQGIG ERVGGVGERT FFPEASRSFQ DSPYHHHQQP LATVMNDPYH HCSTDHNKID
301: HHHTYSSSSS SQHLHHDHDH RQQQCFVLGA DMFNKPTRSV LANSSRQDQN QEEDEKDSSE SSKKSLHHFF GEDWAQNKNS SDSWLDLSSH SRLDTGS

Arabidopsis Description

GRF5Growth-regulating factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8A6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.