Factsheet for Zm00001d006348_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99361	Sorghum	nucleus	89.38	90.04
Zm00001d021362_P001	Maize	extracellular, nucleus	86.81	88.1
Os07t0467500-01	Rice	nucleus	74.73	75.84
TraesCS2D01G246600.1	Wheat	nucleus	71.79	74.24
TraesCS2B01G256600.2	Wheat	nucleus	71.06	73.76
TraesCS2A01G238700.1	Wheat	nucleus	71.79	61.44
HORVU2Hr1G054270.3	Barley	plastid	66.67	60.67
Zm00001d005387_P001	Maize	nucleus	10.62	46.77
Zm00001d042010_P001	Maize	nucleus	10.26	40.58
Zm00001d051456_P001	Maize	nucleus	26.01	32.13
Zm00001d014421_P001	Maize	cytosol	11.36	31.63
Zm00001d002429_P003	Maize	nucleus	22.34	16.99
Zm00001d026240_P006	Maize	plastid	23.08	15.87
Zm00001d035965_P004	Maize	nucleus	21.98	15.75
Zm00001d007465_P001	Maize	nucleus	17.95	15.71
Zm00001d045533_P001	Maize	nucleus	20.88	15.57
Zm00001d017742_P001	Maize	plastid	21.98	14.71
Zm00001d018260_P001	Maize	mitochondrion	20.15	14.63
Zm00001d000238_P001	Maize	nucleus	20.88	14.54
Zm00001d006338_P002	Maize	mitochondrion	14.29	14.03
Zm00001d037117_P001	Maize	mitochondrion, nucleus	18.68	13.86
Zm00001d052112_P001	Maize	mitochondrion, nucleus	20.15	13.72
CDY37044	Canola	nucleus	20.51	12.81
Bra039334.1-P	Field mustard	nucleus	19.78	12.68
CDY27382	Canola	nucleus	20.51	12.61
Zm00001d033396_P003	Maize	nucleus	19.78	12.33
AT2G45480.3	Thale cress	nucleus	19.05	12.06
Zm00001d013555_P001	Maize	nucleus	19.05	11.93
Zm00001d013346_P001	Maize	nucleus	21.61	10.09
Zm00001d033876_P004	Maize	nucleus	21.61	9.95
Zm00001d002049_P001	Maize	cytosol, plastid	1.83	5.1

Protein Annotations

MapMan:15.5.52.1	UniProt:B4FN96	EMBL:BT038584	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0032502	InterPro:GRF	InterPro:Gln-Leu-Gln_QLQ	InterPro:IPR014977	InterPro:IPR014978	ProteinID:ONM23575.1
PFAM:PF08879	PFAM:PF08880	PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF14
SMART:SM00951	UniParc:UPI00017B6D88	InterPro:WRC_dom	EnsemblPlantsGene:Zm00001d006348	EnsemblPlants:Zm00001d006348_P001	EnsemblPlants:Zm00001d006348_T001
SEG:seg	:	:	:	:	:

Description

GRF-transcription factor 2growth-regulating factor 9

Coordinates

chr2:-:205258531..205260875

Molecular Weight (calculated)

28639.2 Da

IEP (calculated)

4.812

GRAVY (calculated)

-0.677

Length

273 amino acids

Sequence
(BLAST)

001: MAAEGEAKNP SGGGEGGNPQ HQQAVQAAPA EPPTAQGEAV QEAGAQATGQ EPEGEKANRD GEGSAGEKDD GACRDLVLVE DPEVLAVEDP EEAAATAALQ
101: EEMKALVASV PDGAGAAFTA MQLQELEQQS RVYQYMAARV PVPTHLVFPV WKSVTGASSE GAQKYPTLLG LATLCLDFGK NPEPEPGRCR RTDGKKWRCW
201: RNTIPNEKYC ERHMHRGRKR PVQVVEEAEP DSASGSKSAP SKATEGAKKV DDKSPGSKKL AVAAAAAAAV QST

Best Arabidopsis Sequence Match ( AT4G37740.1 )
(BLAST)

001: MDIGVHVLGS VTSNENESLG LKELIGTKQD RSGFIGEDCL QRSLKLARTT TRAEEEENLS SSVAAAYCKT MSFHQGIPLM RSASPLSSDS RRQEQMLSFS
101: DKPDALDFSK YVGLDNSSNN KNSLSPFLHQ IPPPSYFRSS GGYGSGGMMM NMSMQGNFTG VKGPFTLTQW AELEQQALIY KYITANVPVP SSLLISIKKS
201: FYPYGSLPPS SFGWGTFHLG FAGGNMDPEP GRCRRTDGKK WRCSRDAVPD QKYCERHINR GRHRSRKPVE VQSGQNQTAA AASKAVTTPQ QPVVAGNTNR
301: SNARASSNRS LAIGSQYINP STESLPNNRG VSIYPSTVNL QPKESPVIHQ KHRNNNNPFE FGHISSDSLL NPNTAKTYGS SFLDFSSNQE KHSGNHNHNS
401: WPEELTSDWT QLSMSIPIAS SSPSSTHNNN NAQEKTTLSP LRLSRELDLS IQTDETTIEP TVKKVNTWIP ISWGNSLGGP LGEVLNSTTN SPTFGSSPTG
501: VLQKSTFCSL SNNSSVSSPI AENNRHNGDY FHYTT

Arabidopsis Description

GRF2GRF2 [Source:UniProtKB/TrEMBL;Acc:A0A178UXW8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.