Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0678800-01 | Rice | nucleus | 75.57 | 79.15 |
| TraesCS6A01G257600.1 | Wheat | nucleus | 71.04 | 74.06 |
| TraesCS6D01G238900.1 | Wheat | nucleus | 71.04 | 73.02 |
| TraesCS6B01G267500.1 | Wheat | nucleus | 69.68 | 72.99 |
| TraesCS2A01G398300.2 | Wheat | nucleus | 70.59 | 69.33 |
| TraesCS2D01G395900.1 | Wheat | nucleus | 71.49 | 69.0 |
| TraesCS2B01G416300.1 | Wheat | nucleus | 70.59 | 68.72 |
| Os04t0574500-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 72.85 | 68.22 |
| GSMUA_Achr5P20170_001 | Banana | extracellular | 52.04 | 67.25 |
| HORVU6Hr1G065740.4 | Barley | nucleus | 63.35 | 65.73 |
| HORVU2Hr1G094460.2 | Barley | mitochondrion, plasma membrane | 65.16 | 64.29 |
| HORVU2Hr1G094470.2 | Barley | nucleus | 68.78 | 60.08 |
| GSMUA_Achr8P12060_001 | Banana | extracellular | 53.39 | 58.42 |
| GSMUA_Achr11P... | Banana | mitochondrion, plasma membrane | 52.49 | 56.59 |
| Zm00001d005387_P001 | Maize | nucleus | 14.03 | 50.0 |
| Zm00001d042010_P001 | Maize | nucleus | 13.57 | 43.48 |
| VIT_02s0025g04910.t01 | Wine grape | nucleus | 35.75 | 37.8 |
| Zm00001d014421_P001 | Maize | cytosol | 14.48 | 32.65 |
| PGSC0003DMT400009997 | Potato | nucleus | 15.84 | 28.69 |
| Solyc08g079800.2.1 | Tomato | nucleus | 25.79 | 26.15 |
| Zm00001d006348_P001 | Maize | nucleus | 32.13 | 26.01 |
| Zm00001d021362_P001 | Maize | extracellular, nucleus | 30.77 | 25.28 |
| Zm00001d007465_P001 | Maize | nucleus | 28.05 | 19.87 |
| Zm00001d002429_P003 | Maize | nucleus | 31.22 | 19.22 |
| Zm00001d006338_P002 | Maize | mitochondrion | 23.08 | 18.35 |
| Zm00001d026240_P006 | Maize | plastid | 31.67 | 17.63 |
| Zm00001d017742_P001 | Maize | plastid | 32.13 | 17.4 |
| Zm00001d035965_P004 | Maize | nucleus | 28.96 | 16.8 |
| Zm00001d045533_P001 | Maize | nucleus | 27.6 | 16.67 |
| Zm00001d000238_P001 | Maize | nucleus | 28.96 | 16.33 |
| Zm00001d037117_P001 | Maize | mitochondrion, nucleus | 26.7 | 16.03 |
| Zm00001d018260_P001 | Maize | mitochondrion | 26.24 | 15.43 |
| Zm00001d033396_P003 | Maize | nucleus | 30.32 | 15.3 |
| Zm00001d052112_P001 | Maize | mitochondrion, nucleus | 26.7 | 14.71 |
| Zm00001d013555_P001 | Maize | nucleus | 28.05 | 14.22 |
| Zm00001d013346_P001 | Maize | nucleus | 33.94 | 12.82 |
| Zm00001d033876_P004 | Maize | nucleus | 34.39 | 12.82 |
| Zm00001d002049_P001 | Maize | cytosol, plastid | 0.45 | 1.02 |
Protein Annotations
| EntrezGene:100286247 | MapMan:15.5.52.1 | ProteinID:AQK54268.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0032502 | InterPro:GRF | InterPro:Gln-Leu-Gln_QLQ | InterPro:IPR014977 | InterPro:IPR014978 | UniProt:K7TZB5 |
| EMBL:KJ727857 | PFAM:PF08879 | PFAM:PF08880 | PFscan:PS51666 | PFscan:PS51667 | PANTHER:PTHR31602 |
| PANTHER:PTHR31602:SF3 | SMART:SM00951 | UniParc:UPI000221E7D9 | InterPro:WRC_dom | EnsemblPlantsGene:Zm00001d051456 | EnsemblPlants:Zm00001d051456_P001 |
| EnsemblPlants:Zm00001d051456_T001 | SEG:seg | : | : | : | : |
Description
GRF-transcription factor 9Growth-regulating factor
Coordinates
chr4:+:159322444..159323547
Molecular Weight (calculated)
23322.0 Da
IEP (calculated)
10.395
GRAVY (calculated)
-0.288
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEDKETDSP QPPAKLPRLS RADTSAGEVT MAASSPLVLG LGLGLGGRGG GGERDADVSP ATVTPKRPSA LTFMQQQELE HQVLIYRYFA AGAPVPVHLV
101: LPIWKSVAAS SFGPQRFPSL MGLGSLCFDY RSSMEPEPGR CRRTDGKKWR CSRDVVPGHK YCERHVHRGR GRSRKPVEAA AAPAAAAGGS SPVLRVAAPQ
201: HVLGLSSPTS VLLAHGAARA T
101: LPIWKSVAAS SFGPQRFPSL MGLGSLCFDY RSSMEPEPGR CRRTDGKKWR CSRDVVPGHK YCERHVHRGR GRSRKPVEAA AAPAAAAGGS SPVLRVAAPQ
201: HVLGLSSPTS VLLAHGAARA T
001: MDLQLKQWRS QQQQQHQTES EEQPSAAKIP KHVFDQIHSH TATSTALPLF TPEPTSSKLS SLSPDSSSRF PKMGSFFSWA QWQELELQAL IYRYMLAGAA
101: VPQELLLPIK KSLLHLSPSY FLHHPLQHLP HYQPAWYLGR AAMDPEPGRC RRTDGKKWRC SRDVFAGHKY CERHMHRGRN RSRKPVETPT TVNATATSMA
201: SSVAAAATTT TATTTSTFAF GGGGGSEEVV GQGGSFFFSG SSNSSSELLH LSQSCSEMKQ ESNNMNNKRP YESHIGFSNN RSDGGHILRP FFDDWPRSSL
301: QEADNSSSPM SSATCLSISM PGNSSSDVSL KLSTGNEEGA RSNNNGRDQQ NMSWWSGGGS NHHHHNMGGP LAEALRSSSS SSPTSVLHQL GVSTQAFH
101: VPQELLLPIK KSLLHLSPSY FLHHPLQHLP HYQPAWYLGR AAMDPEPGRC RRTDGKKWRC SRDVFAGHKY CERHMHRGRN RSRKPVETPT TVNATATSMA
201: SSVAAAATTT TATTTSTFAF GGGGGSEEVV GQGGSFFFSG SSNSSSELLH LSQSCSEMKQ ESNNMNNKRP YESHIGFSNN RSDGGHILRP FFDDWPRSSL
301: QEADNSSSPM SSATCLSISM PGNSSSDVSL KLSTGNEEGA RSNNNGRDQQ NMSWWSGGGS NHHHHNMGGP LAEALRSSSS SSPTSVLHQL GVSTQAFH
Arabidopsis Description
GRF3Growth-regulating factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJR5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.