Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G308800.1 | Wheat | extracellular, plasma membrane, plastid | 93.22 | 94.19 |
| HORVU5Hr1G086390.1 | Barley | extracellular, plasma membrane | 91.79 | 90.12 |
| TraesCS5B01G309700.1 | Wheat | extracellular | 78.03 | 79.33 |
| Zm00001d021197_P001 | Maize | extracellular | 76.18 | 76.49 |
| Os09t0520800-01 | Rice | extracellular, vacuole | 77.21 | 76.11 |
| Zm00001d006161_P001 | Maize | extracellular | 74.13 | 74.43 |
| EER99200 | Sorghum | mitochondrion, plastid | 75.36 | 64.16 |
| GSMUA_AchrUn_... | Banana | cytosol | 54.0 | 63.53 |
| PGSC0003DMT400079675 | Potato | extracellular, vacuole | 54.62 | 55.19 |
| Solyc03g006980.2.1 | Tomato | extracellular | 54.21 | 54.32 |
| KRG91403 | Soybean | nucleus | 53.8 | 53.8 |
| KRH35416 | Soybean | nucleus | 53.8 | 53.8 |
| Solyc08g062280.1.1 | Tomato | cytosol | 16.84 | 45.05 |
| TraesCS2B01G425000.1 | Wheat | extracellular | 46.82 | 44.27 |
| VIT_16s0022g02170.t01 | Wine grape | extracellular, golgi, vacuole | 56.26 | 28.48 |
Protein Annotations
| KEGG:00511+3.2.1.51 | Gene3D:2.60.120.260 | Gene3D:3.20.20.80 | MapMan:50.3.2 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004560 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:Galactose-bd-like_sf |
| InterPro:Glyco_hydro_29 | InterPro:Glycoside_hydrolase_SF | InterPro:IPR008979 | PFAM:PF01120 | PANTHER:PTHR10030 | PANTHER:PTHR10030:SF37 |
| SMART:SM00812 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS5B01G309300 | EnsemblPlants:TraesCS5B01G309300.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5B:+:491623442..491631525
Molecular Weight (calculated)
53426.9 Da
IEP (calculated)
6.463
GRAVY (calculated)
-0.184
Length
487 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRASLLRLA AAMVLTGLVS PQVAVAARAT PPLPVLPIPT AAQLAWQRRE VIMFFHFGMN TFTNSELGTG AEDPALFAPA ALNASQWMDA AAAAGASLAI
101: LVAKHHDGFC LWPSAYTAHS VRASPWHGGA GDVVREFAAA AHARGVDAGL YLSPWDLHDQ EYGREVAYNE YYLAQLHELL TGYGSLSEIW FDGHKDKNAT
201: NMTYHFQEWF QTVRQLQSSS IIFSDAGPDV RWVGNEDGFV GTTCWSTVNR SMITIGATGI ENYLNNGDPW GTDWVPPECD VTIRPGWFWH ENETAKTLSQ
301: LLDIYYTSVG RNCVLLLNAP PNTTGLVEDA DIARLREFRA AITRIFGTDL ADGSTARASS ERGGDFAAGN VLDGRDDTYW APMAEDGRRD GYWVELRRPA
401: RARARPFNVV RIQEHVALGQ RVERHEVYVD GVAVASGTTV GHKRLHRLAG PVVGRTVKIW FAARRGPPVV SAVGLHLDPH EINRPSQ
101: LVAKHHDGFC LWPSAYTAHS VRASPWHGGA GDVVREFAAA AHARGVDAGL YLSPWDLHDQ EYGREVAYNE YYLAQLHELL TGYGSLSEIW FDGHKDKNAT
201: NMTYHFQEWF QTVRQLQSSS IIFSDAGPDV RWVGNEDGFV GTTCWSTVNR SMITIGATGI ENYLNNGDPW GTDWVPPECD VTIRPGWFWH ENETAKTLSQ
301: LLDIYYTSVG RNCVLLLNAP PNTTGLVEDA DIARLREFRA AITRIFGTDL ADGSTARASS ERGGDFAAGN VLDGRDDTYW APMAEDGRRD GYWVELRRPA
401: RARARPFNVV RIQEHVALGQ RVERHEVYVD GVAVASGTTV GHKRLHRLAG PVVGRTVKIW FAARRGPPVV SAVGLHLDPH EINRPSQ
001: MNSQITLFFF FFSILSLSQI SNSSSLLKPH PCPILPLPSS QQLQWQLGSM AMFLHFGPNT FTDSEWGTGK ANPSIFNPTH LNASQWVQIA KDSGFSRVIL
101: TAKHHDGFCL WPSEYTDYSV KSSQWRNGAG DVVAELASAA KEAGIGLGLY LSPWDRHEQC YGKTLEYNEF YLSQMTELLT KYGEIKEVWL DGAKGDGEKD
201: MEYFFDTWFS LIHQLQPKAV IFSDAGPDVR WIGDEAGLAG STCWSLFNRT NAKIGDTEPS YSQEGDGYGQ DWVPAECDVS IRPGWFWHAS ESPKPAVQLL
301: DIYYNSVGRN CLFLLNVPPN SSGLISEQDI KVLEEFSEMK NSIFSNNLAR KAFVNSSSIR GDQSSQFGPK NVLEEGLDKY WAPEENQNEW VLYLEFKDLV
401: SFNVLEIREP IHMGQRIASF HLETRKTGSG EWERVVSGTT VGNKRLLRFL NVVESRSLKL VVDKARTDPL ISYLGLYMDK FSGSSRNTTK ITITRTLKEE
501: QQLHDL
101: TAKHHDGFCL WPSEYTDYSV KSSQWRNGAG DVVAELASAA KEAGIGLGLY LSPWDRHEQC YGKTLEYNEF YLSQMTELLT KYGEIKEVWL DGAKGDGEKD
201: MEYFFDTWFS LIHQLQPKAV IFSDAGPDVR WIGDEAGLAG STCWSLFNRT NAKIGDTEPS YSQEGDGYGQ DWVPAECDVS IRPGWFWHAS ESPKPAVQLL
301: DIYYNSVGRN CLFLLNVPPN SSGLISEQDI KVLEEFSEMK NSIFSNNLAR KAFVNSSSIR GDQSSQFGPK NVLEEGLDKY WAPEENQNEW VLYLEFKDLV
401: SFNVLEIREP IHMGQRIASF HLETRKTGSG EWERVVSGTT VGNKRLLRFL NVVESRSLKL VVDKARTDPL ISYLGLYMDK FSGSSRNTTK ITITRTLKEE
501: QQLHDL
Arabidopsis Description
FUC1Alpha-L-fucosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW72]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.