Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G309300.1 | Wheat | extracellular, plasma membrane, plastid | 94.19 | 93.22 |
| HORVU5Hr1G086390.1 | Barley | extracellular, plasma membrane | 91.49 | 88.91 |
| TraesCS5A01G309000.1 | Wheat | extracellular, golgi | 78.01 | 77.37 |
| Zm00001d021197_P001 | Maize | extracellular | 77.18 | 76.7 |
| Os09t0520800-01 | Rice | extracellular, vacuole | 77.8 | 75.91 |
| Zm00001d006161_P001 | Maize | extracellular | 74.9 | 74.43 |
| EER99200 | Sorghum | mitochondrion, plastid | 76.56 | 64.51 |
| GSMUA_AchrUn_... | Banana | cytosol | 54.36 | 63.28 |
| PGSC0003DMT400079675 | Potato | extracellular, vacuole | 55.39 | 55.39 |
| Solyc03g006980.2.1 | Tomato | extracellular | 55.19 | 54.73 |
| KRG91403 | Soybean | nucleus | 54.15 | 53.59 |
| KRH35416 | Soybean | nucleus | 54.15 | 53.59 |
| TraesCS2A01G407300.1 | Wheat | cytosol | 43.36 | 44.95 |
| Solyc08g062280.1.1 | Tomato | cytosol | 16.8 | 44.51 |
| VIT_16s0022g02170.t01 | Wine grape | extracellular, golgi, vacuole | 57.68 | 28.9 |
Protein Annotations
| KEGG:00511+3.2.1.51 | Gene3D:2.60.120.260 | Gene3D:3.20.20.80 | MapMan:50.3.2 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004560 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:Galactose-bd-like_sf |
| InterPro:Glyco_hydro_29 | InterPro:Glycoside_hydrolase_SF | InterPro:IPR008979 | PFAM:PF01120 | PANTHER:PTHR10030 | PANTHER:PTHR10030:SF37 |
| SMART:SM00812 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS5A01G308800 | EnsemblPlants:TraesCS5A01G308800.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:521288149..521290630
Molecular Weight (calculated)
52877.5 Da
IEP (calculated)
6.889
GRAVY (calculated)
-0.143
Length
482 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGASLLRLA AAMVLTGLVS PPVAVAARAT PPLPVLPIPT AAQLAWQRRE VIMFFHFGMN TFTNSELGTG EEDPALFGPA ALNASQWMDA AAAAGASLAI
101: LVAKHHDGFC LWPSAYTAHS VRASGWRSGA GDVVREFAAA ARARGVDAGL YLSPWDLHDQ RYGREVAYNE YYLAQLHELL TGYGSLSEIW FDGHKDKNAT
201: NMTYHFHEWF QIVRQLQSSS IIFSDAGPDV RWVGNEDGFV GTTCWSTVNR SMITIGATGI ENYLNNGDPW GTEWVPPECD VTIRPGWFWH KNETAKTLSQ
301: LLDIYYTSVG RNCVLLLNAP PNTTGLVEDA DIARLREFRA AVTRIFGTDL ADGSTARASS ERGSGFAAGN VLDGRDDTYW APTAEDEYWV ELRRPARARA
401: RAFNVVRIQE HVALGQRVER HEVYVDGLAV ARGTTVGSKR LHRLVGPVVG RTVKIWFAAR RGPPLVSAVG LHLDPFEANR AR
101: LVAKHHDGFC LWPSAYTAHS VRASGWRSGA GDVVREFAAA ARARGVDAGL YLSPWDLHDQ RYGREVAYNE YYLAQLHELL TGYGSLSEIW FDGHKDKNAT
201: NMTYHFHEWF QIVRQLQSSS IIFSDAGPDV RWVGNEDGFV GTTCWSTVNR SMITIGATGI ENYLNNGDPW GTEWVPPECD VTIRPGWFWH KNETAKTLSQ
301: LLDIYYTSVG RNCVLLLNAP PNTTGLVEDA DIARLREFRA AVTRIFGTDL ADGSTARASS ERGSGFAAGN VLDGRDDTYW APTAEDEYWV ELRRPARARA
401: RAFNVVRIQE HVALGQRVER HEVYVDGLAV ARGTTVGSKR LHRLVGPVVG RTVKIWFAAR RGPPLVSAVG LHLDPFEANR AR
001: MNSQITLFFF FFSILSLSQI SNSSSLLKPH PCPILPLPSS QQLQWQLGSM AMFLHFGPNT FTDSEWGTGK ANPSIFNPTH LNASQWVQIA KDSGFSRVIL
101: TAKHHDGFCL WPSEYTDYSV KSSQWRNGAG DVVAELASAA KEAGIGLGLY LSPWDRHEQC YGKTLEYNEF YLSQMTELLT KYGEIKEVWL DGAKGDGEKD
201: MEYFFDTWFS LIHQLQPKAV IFSDAGPDVR WIGDEAGLAG STCWSLFNRT NAKIGDTEPS YSQEGDGYGQ DWVPAECDVS IRPGWFWHAS ESPKPAVQLL
301: DIYYNSVGRN CLFLLNVPPN SSGLISEQDI KVLEEFSEMK NSIFSNNLAR KAFVNSSSIR GDQSSQFGPK NVLEEGLDKY WAPEENQNEW VLYLEFKDLV
401: SFNVLEIREP IHMGQRIASF HLETRKTGSG EWERVVSGTT VGNKRLLRFL NVVESRSLKL VVDKARTDPL ISYLGLYMDK FSGSSRNTTK ITITRTLKEE
501: QQLHDL
101: TAKHHDGFCL WPSEYTDYSV KSSQWRNGAG DVVAELASAA KEAGIGLGLY LSPWDRHEQC YGKTLEYNEF YLSQMTELLT KYGEIKEVWL DGAKGDGEKD
201: MEYFFDTWFS LIHQLQPKAV IFSDAGPDVR WIGDEAGLAG STCWSLFNRT NAKIGDTEPS YSQEGDGYGQ DWVPAECDVS IRPGWFWHAS ESPKPAVQLL
301: DIYYNSVGRN CLFLLNVPPN SSGLISEQDI KVLEEFSEMK NSIFSNNLAR KAFVNSSSIR GDQSSQFGPK NVLEEGLDKY WAPEENQNEW VLYLEFKDLV
401: SFNVLEIREP IHMGQRIASF HLETRKTGSG EWERVVSGTT VGNKRLLRFL NVVESRSLKL VVDKARTDPL ISYLGLYMDK FSGSSRNTTK ITITRTLKEE
501: QQLHDL
Arabidopsis Description
FUC1Alpha-L-fucosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW72]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.