Factsheet for Solyc08g062280.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g006980.2.1	Tomato	extracellular	71.43	26.75
PGSC0003DMT400079675	Potato	extracellular, vacuole	68.13	25.73
KRH35416	Soybean	nucleus	55.49	20.74
KRG91403	Soybean	nucleus	54.4	20.33
GSMUA_AchrUn_...	Banana	cytosol	42.31	18.6
Zm00001d006161_P001	Maize	extracellular	46.7	17.53
TraesCS5B01G309700.1	Wheat	extracellular	45.6	17.33
HORVU5Hr1G080110.4	Barley	extracellular	45.6	17.22
TraesCS5D01G316000.1	Wheat	extracellular	45.6	17.11
TraesCS5A01G309000.1	Wheat	extracellular, golgi	45.6	17.08
Zm00001d021197_P001	Maize	extracellular	45.05	16.91
TraesCS5B01G309300.1	Wheat	extracellular, plasma membrane, plastid	45.05	16.84
TraesCS5A01G308800.1	Wheat	extracellular, plasma membrane, plastid	44.51	16.8
Os09t0520800-01	Rice	extracellular, vacuole	45.6	16.8
HORVU5Hr1G086390.1	Barley	extracellular, plasma membrane	45.05	16.53
Solyc11g069010.1.1	Tomato	extracellular, golgi	43.96	15.44
EER99200	Sorghum	mitochondrion, plastid	46.15	14.69
VIT_16s0022g02170.t01	Wine grape	extracellular, golgi, vacuole	56.59	10.71

Protein Annotations

KEGG:00511+3.2.1.51	Gene3D:3.20.20.80	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004560
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_29	InterPro:Glycoside_hydrolase_SF	UniProt:K4CL17
PANTHER:PTHR10030	PANTHER:PTHR10030:SF37	SUPFAM:SSF51445	EnsemblPlantsGene:Solyc08g062280.1	EnsemblPlants:Solyc08g062280.1.1	UniParc:UPI000276B0BB

Description

No Description!

Coordinates

chr8:-:50838185..50839311

Molecular Weight (calculated)

20952.8 Da

IEP (calculated)

5.309

GRAVY (calculated)

-0.571

Length

182 amino acids

Sequence
(BLAST)

001: MWLSVSTRLY KEMMSLENRT KLAIYIHVNQ PFMKNKKIQV KMSIILDNDF YLNRGDPKGT DWVPPECDVS IRPGWFLHKS QEPKSLSELL EIYYNSIGRN
101: CVLLLYVPPN TQGLISNSDV QRLKEFTSAI DTIFSTNLAK ECSIEASSQR GGKNGGFGPE NVLDDDNLWT YWDPKDDDKE HN

Best Arabidopsis Sequence Match ( AT2G28100.1 )
(BLAST)

001: MNSQITLFFF FFSILSLSQI SNSSSLLKPH PCPILPLPSS QQLQWQLGSM AMFLHFGPNT FTDSEWGTGK ANPSIFNPTH LNASQWVQIA KDSGFSRVIL
101: TAKHHDGFCL WPSEYTDYSV KSSQWRNGAG DVVAELASAA KEAGIGLGLY LSPWDRHEQC YGKTLEYNEF YLSQMTELLT KYGEIKEVWL DGAKGDGEKD
201: MEYFFDTWFS LIHQLQPKAV IFSDAGPDVR WIGDEAGLAG STCWSLFNRT NAKIGDTEPS YSQEGDGYGQ DWVPAECDVS IRPGWFWHAS ESPKPAVQLL
301: DIYYNSVGRN CLFLLNVPPN SSGLISEQDI KVLEEFSEMK NSIFSNNLAR KAFVNSSSIR GDQSSQFGPK NVLEEGLDKY WAPEENQNEW VLYLEFKDLV
401: SFNVLEIREP IHMGQRIASF HLETRKTGSG EWERVVSGTT VGNKRLLRFL NVVESRSLKL VVDKARTDPL ISYLGLYMDK FSGSSRNTTK ITITRTLKEE
501: QQLHDL

Arabidopsis Description

FUC1Alpha-L-fucosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW72]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.