CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021197_P001	Maize	extracellular	74.48	87.84
Zm00001d006161_P001	Maize	extracellular	71.85	84.74
Os09t0520800-01	Rice	extracellular, vacuole	68.18	78.95
HORVU5Hr1G080110.4	Barley	extracellular	65.03	77.18
TraesCS5B01G309700.1	Wheat	extracellular	64.16	76.62
TraesCS5A01G308800.1	Wheat	extracellular, plasma membrane, plastid	64.51	76.56
TraesCS5B01G309300.1	Wheat	extracellular, plasma membrane, plastid	64.16	75.36
TraesCS5D01G316000.1	Wheat	extracellular	63.81	75.26
HORVU5Hr1G086390.1	Barley	extracellular, plasma membrane	65.21	75.2
TraesCS5A01G309000.1	Wheat	extracellular, golgi	63.46	74.69
GSMUA_AchrUn_...	Banana	cytosol	48.6	67.15
PGSC0003DMT400079675	Potato	extracellular, vacuole	48.08	57.05
Solyc03g006980.2.1	Tomato	extracellular	48.25	56.79
KRH35416	Soybean	nucleus	47.73	56.06
KRG91403	Soybean	nucleus	47.38	55.65
Solyc08g062280.1.1	Tomato	cytosol	14.69	46.15
EES12650	Sorghum	extracellular	41.08	45.81
VIT_16s0022g02170.t01	Wine grape	extracellular, golgi, vacuole	49.65	29.52

Protein Annotations

KEGG:00511+3.2.1.51	Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:50.3.2	UniProt:C5X5H5	EnsemblPlants:EER99200
ProteinID:EER99200	ProteinID:EER99200.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004560	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Galactose-bd-like_sf	InterPro:Glyco_hydro_29	InterPro:Glycoside_hydrolase_SF
InterPro:IPR008979	PFAM:PF01120	PANTHER:PTHR10030	PANTHER:PTHR10030:SF37	SMART:SM00812	EnsemblPlantsGene:SORBI_3002G268200
SUPFAM:SSF49785	SUPFAM:SSF51445	UniParc:UPI00081ACF4A	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:65226517..65228594

Molecular Weight (calculated)

62759.7 Da

IEP (calculated)

8.013

GRAVY (calculated)

-0.392

Length

572 amino acids

Sequence
(BLAST)

001: MHARAARGRA RQGKAKRQAS HAPVTTTPPE RSRRAPSAAS SSPESHSISK RAQTHPASPP PPPFRPAYIA THTLAHREHT SIDDDTMASS LLCLAALAVV
101: SVLVTTTEAL PPRATPPPLP VLPIPSAPQL KWQRREVIMF FHFGMNTFTD SEWGTGSEAP SLFRPAALNA TQWMDAARAA GASLAILVAK HHDGFCLWPS
201: QYTAHSVRAS PWRGGRGDVV REFVDAARAR GVDAGLYLSP WDRHDERYGN EVAYNEYYEA QLHELLTGYG SVSEIWFDGA KGKNATNMTY HFQEWFQTVK
301: QLQRSINIFS DDGPDVRWVG DEKGYAGTTC WSTVNRSMIT IGEAGIEKYL NEGDPRGRDW VPPECDVSIR PGWFWHKNET AKPLSQLLEI YYNSVGRNCV
401: LLLNAPPNTT GLVQDADIAR LREFGAAVST IFGTDLAAGS EARASSERGA GFAARNVVDG RDDTYWAPAP ATAGEDDGYY WIELRRPGAR AFNVVRIQEH
501: VALGQRVERH AVYVDGAPVA NGTTVGHKRL HRLPSAVVAG TTVRVWIEAR RGPPLLSAVG LHYDPFAAAD TM

Best Arabidopsis Sequence Match ( AT2G28100.1 )
(BLAST)

001: MNSQITLFFF FFSILSLSQI SNSSSLLKPH PCPILPLPSS QQLQWQLGSM AMFLHFGPNT FTDSEWGTGK ANPSIFNPTH LNASQWVQIA KDSGFSRVIL
101: TAKHHDGFCL WPSEYTDYSV KSSQWRNGAG DVVAELASAA KEAGIGLGLY LSPWDRHEQC YGKTLEYNEF YLSQMTELLT KYGEIKEVWL DGAKGDGEKD
201: MEYFFDTWFS LIHQLQPKAV IFSDAGPDVR WIGDEAGLAG STCWSLFNRT NAKIGDTEPS YSQEGDGYGQ DWVPAECDVS IRPGWFWHAS ESPKPAVQLL
301: DIYYNSVGRN CLFLLNVPPN SSGLISEQDI KVLEEFSEMK NSIFSNNLAR KAFVNSSSIR GDQSSQFGPK NVLEEGLDKY WAPEENQNEW VLYLEFKDLV
401: SFNVLEIREP IHMGQRIASF HLETRKTGSG EWERVVSGTT VGNKRLLRFL NVVESRSLKL VVDKARTDPL ISYLGLYMDK FSGSSRNTTK ITITRTLKEE
501: QQLHDL

Arabidopsis Description

FUC1Alpha-L-fucosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW72]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.