Factsheet for TraesCS5A01G309000.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G316000.1	Wheat	extracellular	96.09	96.29
TraesCS5B01G309700.1	Wheat	extracellular	94.03	95.41
HORVU5Hr1G080110.4	Barley	extracellular	89.51	90.25
TraesCS5A01G308800.1	Wheat	extracellular, plasma membrane, plastid	77.37	78.01
Zm00001d021197_P001	Maize	extracellular	76.34	76.49
Zm00001d006161_P001	Maize	extracellular	75.31	75.46
Os09t0520800-01	Rice	extracellular, vacuole	74.49	73.28
GSMUA_AchrUn_...	Banana	cytosol	54.53	64.01
EER99200	Sorghum	mitochondrion, plastid	74.69	63.46
KRG91403	Soybean	nucleus	55.35	55.24
KRH35416	Soybean	nucleus	55.35	55.24
PGSC0003DMT400079675	Potato	extracellular, vacuole	54.12	54.56
Solyc03g006980.2.1	Tomato	extracellular	54.53	54.53
TraesCS2A01G407300.1	Wheat	cytosol	44.03	46.02
Solyc08g062280.1.1	Tomato	cytosol	17.08	45.6
VIT_16s0022g02170.t01	Wine grape	extracellular, golgi, vacuole	56.17	28.38

Protein Annotations

KEGG:00511+3.2.1.51	Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0004560	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Galactose-bd-like_sf
InterPro:Glyco_hydro_29	InterPro:Glycoside_hydrolase_SF	InterPro:IPR008979	PFAM:PF01120	PANTHER:PTHR10030	PANTHER:PTHR10030:SF37
SMART:SM00812	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5A01G309000
EnsemblPlants:TraesCS5A01G309000.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:521299618..521301250

Molecular Weight (calculated)

53306.0 Da

IEP (calculated)

7.025

GRAVY (calculated)

-0.190

Length

486 amino acids

Sequence
(BLAST)

001: MGGGPSMSLL CYYCLVFAAG LVSASAATGT SVPPPLPMLP IPTAAQLAWQ RREVIMFFHF GMNTFTDVER GTGAEDPALF APAALNANQW MDAAAAAGAS
101: LAILVAKHHD GFCLWPSAYT AHSVRASPWH AGNGDVVGEF TAAARARGVD AGLYLSPWDL HDRRYGQEVA YNEYYMAQLH ELLTRYGKVW EIWFDGNKGT
201: NATKMTYHFQ EWFDTVRQLQ GSINIFSDAG PDIRWVGDEN GFAGTTCWSA VNRSSITIGS AGIEKYLNEG DPRGTEWVPP ECDVSIRPGW FWHRNETAKP
301: LSQLLNIYYN SVGRNCVLLL NAPPNATGLI DGADMARLRE FGAAVRRIFG TDLAEGSRAR ASSERGGGFE AGKVLDGREE TYWAPTAEDG WRNGYWIELR
401: RPAGARAFNV VRVQEHVALG QRVERHEVYV DGVAVARGTT VGHKRLHRLA CPVAGRTVRI WFAARRGPPL VSAVGLHLDP YATDVM

Best Arabidopsis Sequence Match ( AT2G28100.1 )
(BLAST)

001: MNSQITLFFF FFSILSLSQI SNSSSLLKPH PCPILPLPSS QQLQWQLGSM AMFLHFGPNT FTDSEWGTGK ANPSIFNPTH LNASQWVQIA KDSGFSRVIL
101: TAKHHDGFCL WPSEYTDYSV KSSQWRNGAG DVVAELASAA KEAGIGLGLY LSPWDRHEQC YGKTLEYNEF YLSQMTELLT KYGEIKEVWL DGAKGDGEKD
201: MEYFFDTWFS LIHQLQPKAV IFSDAGPDVR WIGDEAGLAG STCWSLFNRT NAKIGDTEPS YSQEGDGYGQ DWVPAECDVS IRPGWFWHAS ESPKPAVQLL
301: DIYYNSVGRN CLFLLNVPPN SSGLISEQDI KVLEEFSEMK NSIFSNNLAR KAFVNSSSIR GDQSSQFGPK NVLEEGLDKY WAPEENQNEW VLYLEFKDLV
401: SFNVLEIREP IHMGQRIASF HLETRKTGSG EWERVVSGTT VGNKRLLRFL NVVESRSLKL VVDKARTDPL ISYLGLYMDK FSGSSRNTTK ITITRTLKEE
501: QQLHDL

Arabidopsis Description

FUC1Alpha-L-fucosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW72]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.