Factsheet for TraesCS5B01G309700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G316000.1	Wheat	extracellular	96.87	95.67
TraesCS5A01G309000.1	Wheat	extracellular, golgi	95.41	94.03
HORVU5Hr1G080110.4	Barley	extracellular	92.28	91.7
TraesCS5B01G309300.1	Wheat	extracellular, plasma membrane, plastid	79.33	78.03
Zm00001d021197_P001	Maize	extracellular	77.66	76.7
Zm00001d006161_P001	Maize	extracellular	76.62	75.67
Os09t0520800-01	Rice	extracellular, vacuole	75.78	73.48
GSMUA_AchrUn_...	Banana	cytosol	55.53	64.25
EER99200	Sorghum	mitochondrion, plastid	76.62	64.16
KRH35416	Soybean	nucleus	55.74	54.83
KRG91403	Soybean	nucleus	55.53	54.62
PGSC0003DMT400079675	Potato	extracellular, vacuole	54.49	54.15
Solyc03g006980.2.1	Tomato	extracellular	54.91	54.12
TraesCS2B01G425000.1	Wheat	extracellular	49.69	46.21
Solyc08g062280.1.1	Tomato	cytosol	17.33	45.6
VIT_16s0022g02170.t01	Wine grape	extracellular, golgi, vacuole	57.2	28.48

Protein Annotations

KEGG:00511+3.2.1.51	Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0004560	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Galactose-bd-like_sf
InterPro:Glyco_hydro_29	InterPro:Glycoside_hydrolase_SF	InterPro:IPR008979	PFAM:PF01120	PANTHER:PTHR10030	PANTHER:PTHR10030:SF37
SMART:SM00812	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5B01G309700
EnsemblPlants:TraesCS5B01G309700.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:491852250..491853871

Molecular Weight (calculated)

52458.0 Da

IEP (calculated)

7.193

GRAVY (calculated)

-0.166

Length

479 amino acids

Sequence
(BLAST)

001: MSLLCYYCLV FAAGIVAAAG AGTSVPPPLP VLPIPTAAQL AWQRREVIMF FHFGMNTFTD VERGTGAEDP ALFAPAALNA TQWMDAAAAA GASLAILVAK
101: HHDGFCLWPS AYTAHSVRAS PWRAGSGDVV GEFTAAARAR GVDAGLYLSP WDLHDHRYGQ EVAYNEYYMA QLHELLTRYG RVWEIWFDGN KGTNATKMTY
201: HFQEWFDTVR QLQGSINIFS DAGPDIRWVG DENGFAGTTC WSAVNQSSIT IGSAGIEKYL NEGDPRGTEW VPPECDVSIR PGWFWHRNET AKPLSQLLNI
301: YYNSVGRNCV LLLNAPPNAT GLIDGADMAR LREFGAAVKR IFGTDLAEGS RARASSERGG GFEAGKVLDG RDGTYWAPTA EDGRRNGYWI ELRRPAGARA
401: FNVVRVQEHV ALGQRVERHE VYVDGVAVAR GTTVGHKRLH RLACPVAGRT VKIWFAARRG PPLVSAVGLH LDPYTTDVM

Best Arabidopsis Sequence Match ( AT2G28100.1 )
(BLAST)

001: MNSQITLFFF FFSILSLSQI SNSSSLLKPH PCPILPLPSS QQLQWQLGSM AMFLHFGPNT FTDSEWGTGK ANPSIFNPTH LNASQWVQIA KDSGFSRVIL
101: TAKHHDGFCL WPSEYTDYSV KSSQWRNGAG DVVAELASAA KEAGIGLGLY LSPWDRHEQC YGKTLEYNEF YLSQMTELLT KYGEIKEVWL DGAKGDGEKD
201: MEYFFDTWFS LIHQLQPKAV IFSDAGPDVR WIGDEAGLAG STCWSLFNRT NAKIGDTEPS YSQEGDGYGQ DWVPAECDVS IRPGWFWHAS ESPKPAVQLL
301: DIYYNSVGRN CLFLLNVPPN SSGLISEQDI KVLEEFSEMK NSIFSNNLAR KAFVNSSSIR GDQSSQFGPK NVLEEGLDKY WAPEENQNEW VLYLEFKDLV
401: SFNVLEIREP IHMGQRIASF HLETRKTGSG EWERVVSGTT VGNKRLLRFL NVVESRSLKL VVDKARTDPL ISYLGLYMDK FSGSSRNTTK ITITRTLKEE
501: QQLHDL

Arabidopsis Description

FUC1Alpha-L-fucosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW72]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.