Factsheet for TraesCS5D01G316000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G309700.1	Wheat	extracellular	95.67	96.87
TraesCS5A01G309000.1	Wheat	extracellular, golgi	96.29	96.09
HORVU5Hr1G080110.4	Barley	extracellular	91.55	92.12
Zm00001d021197_P001	Maize	extracellular	77.32	77.32
Zm00001d006161_P001	Maize	extracellular	75.67	75.67
Os09t0520800-01	Rice	extracellular, vacuole	74.43	73.08
GSMUA_AchrUn_...	Banana	cytosol	55.05	64.49
EER99200	Sorghum	mitochondrion, plastid	75.26	63.81
KRH35416	Soybean	nucleus	55.46	55.24
KRG91403	Soybean	nucleus	55.26	55.03
PGSC0003DMT400079675	Potato	extracellular, vacuole	54.43	54.77
Solyc03g006980.2.1	Tomato	extracellular	54.85	54.73
TraesCS2D01G404300.1	Wheat	extracellular	49.28	46.41
Solyc08g062280.1.1	Tomato	cytosol	17.11	45.6
VIT_16s0022g02170.t01	Wine grape	extracellular, golgi, vacuole	56.7	28.59

Protein Annotations

KEGG:00511+3.2.1.51	Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0004560	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Galactose-bd-like_sf
InterPro:Glyco_hydro_29	InterPro:Glycoside_hydrolase_SF	InterPro:IPR008979	PFAM:PF01120	PANTHER:PTHR10030	PANTHER:PTHR10030:SF37
SMART:SM00812	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5D01G316000
EnsemblPlants:TraesCS5D01G316000.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:410065147..410066771

Molecular Weight (calculated)

53068.9 Da

IEP (calculated)

7.394

GRAVY (calculated)

-0.171

Length

485 amino acids

Sequence
(BLAST)

001: MGGGPSMSLL CYYCLVFVAG VVAAAGAGTS VPPPLPVLPI PTAAQLAWQR REVIMFFHFG MNTFTDVERG TGAENPALFA PAALNATQWM DAAAAAGASL
101: AILVAKHHDG FCLWPSAYTA HSVRASPWRA GNGDVVGEFT AAARARGVDA GLYLSPWDLH DRHYGQEVAY NEYYMAQLHE LLTRYGRVWE IWFDGNKGTN
201: ATKMTYHFQE WFDTVRQLQG SINIFSDAGP DIRWVGDEKG FAGTTCWSAV NQSSITIGSA GIEKYLNEGD PRGTEWVPPE CDVSIRPGWF WHRNETAKPL
301: SQLLNIYYNS VGRNCVLLLN APPNATGLID GADMARLREF GAAVKRIFGT DLAEGSRARA SSERGGGFEA GKVLDGREET YWAPTAEDGR RNGYWIELRR
401: PAGARAFNVV RIQEHVALGQ RVERHEVYVD GVAVARGTTV GHKRLHRLAC PVAGRTVKIW FAARRGPPLV SAVGLHLDPY ATDVM

Best Arabidopsis Sequence Match ( AT2G28100.1 )
(BLAST)

001: MNSQITLFFF FFSILSLSQI SNSSSLLKPH PCPILPLPSS QQLQWQLGSM AMFLHFGPNT FTDSEWGTGK ANPSIFNPTH LNASQWVQIA KDSGFSRVIL
101: TAKHHDGFCL WPSEYTDYSV KSSQWRNGAG DVVAELASAA KEAGIGLGLY LSPWDRHEQC YGKTLEYNEF YLSQMTELLT KYGEIKEVWL DGAKGDGEKD
201: MEYFFDTWFS LIHQLQPKAV IFSDAGPDVR WIGDEAGLAG STCWSLFNRT NAKIGDTEPS YSQEGDGYGQ DWVPAECDVS IRPGWFWHAS ESPKPAVQLL
301: DIYYNSVGRN CLFLLNVPPN SSGLISEQDI KVLEEFSEMK NSIFSNNLAR KAFVNSSSIR GDQSSQFGPK NVLEEGLDKY WAPEENQNEW VLYLEFKDLV
401: SFNVLEIREP IHMGQRIASF HLETRKTGSG EWERVVSGTT VGNKRLLRFL NVVESRSLKL VVDKARTDPL ISYLGLYMDK FSGSSRNTTK ITITRTLKEE
501: QQLHDL

Arabidopsis Description

FUC1Alpha-L-fucosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW72]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.