Factsheet for Solyc03g006980.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079675	Potato	extracellular, vacuole	91.36	92.12
Solyc08g062280.1.1	Tomato	cytosol	26.75	71.43
KRG91403	Soybean	nucleus	66.26	66.12
KRH35416	Soybean	nucleus	66.26	66.12
GSMUA_AchrUn_...	Banana	cytosol	52.88	62.08
Zm00001d006161_P001	Maize	extracellular	56.79	56.91
Zm00001d021197_P001	Maize	extracellular	56.38	56.49
TraesCS5A01G308800.1	Wheat	extracellular, plasma membrane, plastid	54.73	55.19
HORVU5Hr1G080110.4	Barley	extracellular	54.73	55.19
TraesCS5B01G309700.1	Wheat	extracellular	54.12	54.91
TraesCS5D01G316000.1	Wheat	extracellular	54.73	54.85
TraesCS5A01G309000.1	Wheat	extracellular, golgi	54.53	54.53
Os09t0520800-01	Rice	extracellular, vacuole	55.35	54.45
TraesCS5B01G309300.1	Wheat	extracellular, plasma membrane, plastid	54.32	54.21
HORVU5Hr1G086390.1	Barley	extracellular, plasma membrane	54.53	53.43
EER99200	Sorghum	mitochondrion, plastid	56.79	48.25
Solyc11g069010.1.1	Tomato	extracellular, golgi	47.94	44.98
VIT_16s0022g02170.t01	Wine grape	extracellular, golgi, vacuole	68.11	34.41

Protein Annotations

KEGG:00511+3.2.1.51	Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0004560	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Galactose-bd-like_sf	InterPro:Glyco_hydro_29
InterPro:Glycoside_hydrolase_SF	InterPro:IPR008979	UniProt:K4BEC1	PFAM:PF01120	PANTHER:PTHR10030	PANTHER:PTHR10030:SF37
SMART:SM00812	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc03g006980.2	EnsemblPlants:Solyc03g006980.2.1
UniParc:UPI0002767D73	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3:+:1541306..1544689

Molecular Weight (calculated)

54780.6 Da

IEP (calculated)

5.624

GRAVY (calculated)

-0.397

Length

486 amino acids

Sequence
(BLAST)

001: MTNPCYYTCL SCLIMTLFQL IIPSQETQIT PPPLPILPLP NYAQLKWQQR ELIMFLHFGV NTFTDSEWGT GVENPSIFNP TNLDANQWVD TAVQAGVSLV
101: ILTAKHHDGF CLWPSKYTDH SVIKSPWKNG QGDVVREFVN AAKARGVDVG LYLSPWDRHD KSYGLNKEYN EHYLAQLQEL LNEYGDVKEI WFDGAKGSNT
201: PNMTYYFEDW FAIVNELQSA INIFSDAGPG VRWVGNEQGF AGNTSWSTIN RTLLSIGGSD ADYLNRGDPK GTDWVPPECD VSIRPGWFWH KSQEPKSLSE
301: LLEIYYNSIG RNCVLLLNVP PNTQGLISNS DVQRLKEFTS AINTIFSTNL AKDCSIEASS QRGGKNGGFG PENVLDDDNL WTYWGPKDDD KEHNWIEFKT
401: KSDKPLRFNV VRIQEAIGLG QRVKSHQIYV DGKIIANGTT IGYKKLHRIE KGMVNNAKSV KIEIIESKGT PLISSIGLHF DPFWWX

Best Arabidopsis Sequence Match ( AT2G28100.1 )
(BLAST)

001: MNSQITLFFF FFSILSLSQI SNSSSLLKPH PCPILPLPSS QQLQWQLGSM AMFLHFGPNT FTDSEWGTGK ANPSIFNPTH LNASQWVQIA KDSGFSRVIL
101: TAKHHDGFCL WPSEYTDYSV KSSQWRNGAG DVVAELASAA KEAGIGLGLY LSPWDRHEQC YGKTLEYNEF YLSQMTELLT KYGEIKEVWL DGAKGDGEKD
201: MEYFFDTWFS LIHQLQPKAV IFSDAGPDVR WIGDEAGLAG STCWSLFNRT NAKIGDTEPS YSQEGDGYGQ DWVPAECDVS IRPGWFWHAS ESPKPAVQLL
301: DIYYNSVGRN CLFLLNVPPN SSGLISEQDI KVLEEFSEMK NSIFSNNLAR KAFVNSSSIR GDQSSQFGPK NVLEEGLDKY WAPEENQNEW VLYLEFKDLV
401: SFNVLEIREP IHMGQRIASF HLETRKTGSG EWERVVSGTT VGNKRLLRFL NVVESRSLKL VVDKARTDPL ISYLGLYMDK FSGSSRNTTK ITITRTLKEE
501: QQLHDL

Arabidopsis Description

FUC1Alpha-L-fucosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW72]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.