Factsheet for HORVU5Hr1G086390.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
TargetP:	secretory
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G309300.1	Wheat	extracellular, plasma membrane, plastid	90.12	91.79
TraesCS5A01G308800.1	Wheat	extracellular, plasma membrane, plastid	88.91	91.49
HORVU5Hr1G080110.4	Barley	extracellular	76.81	79.05
Zm00001d021197_P001	Maize	extracellular	75.81	77.53
Os09t0520800-01	Rice	extracellular, vacuole	76.01	76.32
Zm00001d006161_P001	Maize	extracellular	73.39	75.05
EER99200	Sorghum	mitochondrion, plastid	75.2	65.21
GSMUA_AchrUn_...	Banana	cytosol	53.02	63.53
PGSC0003DMT400079675	Potato	extracellular, vacuole	53.43	54.98
Solyc03g006980.2.1	Tomato	extracellular	53.43	54.53
KRG91403	Soybean	nucleus	52.42	53.39
KRH35416	Soybean	nucleus	52.42	53.39
Solyc08g062280.1.1	Tomato	cytosol	16.53	45.05
HORVU2Hr1G096280.1	Barley	endoplasmic reticulum	5.85	39.73
VIT_16s0022g02170.t01	Wine grape	extracellular, golgi, vacuole	55.85	28.79
HORVU1Hr1G057300.1	Barley	cytosol, extracellular	5.85	23.39

Protein Annotations

KEGG:00511+3.2.1.51	Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:50.3.2	UniProt:A0A287S4E4	GO:GO:0003674
GO:GO:0003824	GO:GO:0004560	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Galactose-bd-like_sf	InterPro:Glyco_hydro_29	InterPro:Glycoside_hydrolase_SF	EnsemblPlantsGene:HORVU5Hr1G086390	EnsemblPlants:HORVU5Hr1G086390.1	InterPro:IPR008979
PFAM:PF01120	PANTHER:PTHR10030	PANTHER:PTHR10030:SF37	SMART:SM00812	SUPFAM:SSF49785	SUPFAM:SSF51445
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000B461527	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr5H:-:576234523..576249439

Molecular Weight (calculated)

54146.9 Da

IEP (calculated)

6.560

GRAVY (calculated)

-0.160

Length

496 amino acids

Sequence
(BLAST)

001: EDRRIGDMGG ASLLHLASAV VAAGLVFPAV AVGAPEPPPL PVLPIPTAAQ LRWQRREVIM FFHLGMNTFT DSELGTGAED PALFAPAALN ASQWMDAAAA
101: AGASLAILVA KHHDGFCLWP SAYTAHSVHA SPWRGGAGDV VREFAAAARA RGVDAGLYLS PWDLHDQRYG REVAYNEYYL AQLHEILTGY GSLSEIWFDG
201: HKDKNATNMT YHFQEWFQTV RQLQSSSIIF SDAGPDVRWV GNEDGFVGTT CWSTVNRSMI TIGATGIENY LNNGDPWGAD WVPPECDVTI RPGWFWHKNE
301: TAKTLSQLLN IYYTSVGRNC VLLLNAPPNT TGLVEDADIA RLREFRAAVT RIFGTDLAEG STARASSERG GGFAAGNVLD GRDDTYWAPM AEDGYWVELR
401: RPAGARAFNV VRIQEHVALG QRVERHEVYV DGVAVASGTT VGHKRLHRLA RPVVGRTVKI WFAARRGPPL VSAVGLHLDP HETTRAPQYK LNGIAP

Best Arabidopsis Sequence Match ( AT2G28100.1 )
(BLAST)

001: MNSQITLFFF FFSILSLSQI SNSSSLLKPH PCPILPLPSS QQLQWQLGSM AMFLHFGPNT FTDSEWGTGK ANPSIFNPTH LNASQWVQIA KDSGFSRVIL
101: TAKHHDGFCL WPSEYTDYSV KSSQWRNGAG DVVAELASAA KEAGIGLGLY LSPWDRHEQC YGKTLEYNEF YLSQMTELLT KYGEIKEVWL DGAKGDGEKD
201: MEYFFDTWFS LIHQLQPKAV IFSDAGPDVR WIGDEAGLAG STCWSLFNRT NAKIGDTEPS YSQEGDGYGQ DWVPAECDVS IRPGWFWHAS ESPKPAVQLL
301: DIYYNSVGRN CLFLLNVPPN SSGLISEQDI KVLEEFSEMK NSIFSNNLAR KAFVNSSSIR GDQSSQFGPK NVLEEGLDKY WAPEENQNEW VLYLEFKDLV
401: SFNVLEIREP IHMGQRIASF HLETRKTGSG EWERVVSGTT VGNKRLLRFL NVVESRSLKL VVDKARTDPL ISYLGLYMDK FSGSSRNTTK ITITRTLKEE
501: QQLHDL

Arabidopsis Description

FUC1Alpha-L-fucosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW72]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.