Factsheet for HORVU2Hr1G096280.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
TargetP:	secretory

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G018030.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G28100.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G404300.1	Wheat	extracellular	93.15	13.2
TraesCS2B01G425000.1	Wheat	extracellular	93.15	13.2
EES12650	Sorghum	extracellular	71.23	10.14
Os04t0560400-01	Rice	extracellular, mitochondrion, plasma membrane	67.12	9.5
Zm00001d002682_P001	Maize	extracellular	71.23	8.0
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi	56.16	7.96
KRH22840	Soybean	plastid	52.05	7.1
CDX77155	Canola	plastid	46.58	7.02
CDY30508	Canola	plastid	46.58	6.85
Bra034388.1-P	Field mustard	plastid	46.58	6.85
HORVU5Hr1G080110.4	Barley	extracellular	43.84	6.64
VIT_06s0061g00480.t01	Wine grape	plastid	49.32	6.61
AT2G28100.1	Thale cress	extracellular, golgi	43.84	6.32
HORVU5Hr1G086390.1	Barley	extracellular, plasma membrane	39.73	5.85
Solyc11g069010.1.1	Tomato	extracellular, golgi	41.1	5.79
TraesCS2A01G407300.1	Wheat	cytosol	30.14	4.73
PGSC0003DMT400050536	Potato	cytosol	24.66	3.85
KRH26522	Soybean	cytosol	0.0	0.0
HORVU1Hr1G057300.1	Barley	cytosol, extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU2Hr1G096280.1	EnsemblPlantsGene:HORVU2Hr1G096280	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004560
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_29	InterPro:Glycoside_hydrolase_SF
KEGG:00511+3.2.1.51	PANTHER:PTHR10030	PANTHER:PTHR10030:SF27	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF51445
TMHMM:TMhelix	UniParc:UPI000B4739DB	UniProt:A0A287J1U9	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrchr2H:+:673801233..673801680

Molecular Weight (calculated)

7693.4 Da

IEP (calculated)

6.326

GRAVY (calculated)

0.577

Length

73 amino acids

Sequence
(BLAST)

1: MSTTIVLLLV HLHLLLCAHG ATAVAATATP PPLTVLPVPS YAQLQWQLSE MALFIHFGPN TFTDSEWGSG HAX

Best Arabidopsis Sequence Match ( AT2G28100.1 )
(BLAST)

001: MNSQITLFFF FFSILSLSQI SNSSSLLKPH PCPILPLPSS QQLQWQLGSM AMFLHFGPNT FTDSEWGTGK ANPSIFNPTH LNASQWVQIA KDSGFSRVIL
101: TAKHHDGFCL WPSEYTDYSV KSSQWRNGAG DVVAELASAA KEAGIGLGLY LSPWDRHEQC YGKTLEYNEF YLSQMTELLT KYGEIKEVWL DGAKGDGEKD
201: MEYFFDTWFS LIHQLQPKAV IFSDAGPDVR WIGDEAGLAG STCWSLFNRT NAKIGDTEPS YSQEGDGYGQ DWVPAECDVS IRPGWFWHAS ESPKPAVQLL
301: DIYYNSVGRN CLFLLNVPPN SSGLISEQDI KVLEEFSEMK NSIFSNNLAR KAFVNSSSIR GDQSSQFGPK NVLEEGLDKY WAPEENQNEW VLYLEFKDLV
401: SFNVLEIREP IHMGQRIASF HLETRKTGSG EWERVVSGTT VGNKRLLRFL NVVESRSLKL VVDKARTDPL ISYLGLYMDK FSGSSRNTTK ITITRTLKEE
501: QQLHDL

Arabidopsis Description

FUC1Alpha-L-fucosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW72]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.