Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 6
- extracellular 6
- plastid 2
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77155 | Canola | plastid | 79.64 | 83.26 |
| CDY30508 | Canola | plastid | 81.42 | 83.06 |
| Bra034388.1-P | Field mustard | plastid | 80.83 | 82.46 |
| PGSC0003DMT400050536 | Potato | cytosol | 60.08 | 64.96 |
| Solyc11g069010.1.1 | Tomato | extracellular, golgi | 64.23 | 62.74 |
| VIT_06s0061g00480.t01 | Wine grape | plastid | 67.19 | 62.39 |
| KRH22840 | Soybean | plastid | 62.06 | 58.69 |
| TraesCS2A01G407300.1 | Wheat | cytosol | 53.16 | 57.85 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 58.7 | 57.67 |
| EES12650 | Sorghum | extracellular | 57.11 | 56.34 |
| Os04t0560400-01 | Rice | extracellular, mitochondrion, plasma membrane | 56.32 | 55.23 |
| TraesCS2B01G425000.1 | Wheat | extracellular | 56.13 | 55.15 |
| TraesCS2D01G404300.1 | Wheat | extracellular | 55.93 | 54.95 |
| KRH26522 | Soybean | cytosol | 29.05 | 52.88 |
| Zm00001d002682_P001 | Maize | extracellular | 56.52 | 44.0 |
| HORVU2Hr1G096280.1 | Barley | endoplasmic reticulum | 6.32 | 43.84 |
| HORVU1Hr1G057300.1 | Barley | cytosol, extracellular | 8.1 | 33.06 |
Protein Annotations
| KEGG:00511+3.2.1.51 | Gene3D:2.60.120.260 | Gene3D:3.20.20.80 | MapMan:50.3.2 | EntrezGene:817355 | UniProt:A0A178VQ23 |
| ProteinID:AAC98456.1 | ProteinID:AEC08079.1 | EMBL:AK119039 | ArrayExpress:AT2G28100 | EnsemblPlantsGene:AT2G28100 | RefSeq:AT2G28100 |
| TAIR:AT2G28100 | RefSeq:AT2G28100-TAIR-G | EnsemblPlants:AT2G28100.1 | TAIR:AT2G28100.1 | Symbol:ATFUC1 | Unigene:At.38664 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004560 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005975 | GO:GO:0006516 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0019538 |
| GO:GO:0048046 | InterPro:Galactose-bd-like_sf | InterPro:Glyco_hydro_29 | InterPro:Glycoside_hydrolase_SF | InterPro:IPR008979 | RefSeq:NP_180377.2 |
| ProteinID:OAP08537.1 | PFAM:PF01120 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0025022 | PANTHER:PTHR10030 | PANTHER:PTHR10030:SF27 | UniProt:Q8GW72 | SMART:SM00812 | SUPFAM:SSF49785 |
| SUPFAM:SSF51445 | SignalP:SignalP-noTM | UniParc:UPI0000196CCE | SEG:seg | : | : |
Description
FUC1Alpha-L-fucosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW72]
Coordinates
chr2:+:11974663..11976600
Molecular Weight (calculated)
57189.3 Da
IEP (calculated)
5.131
GRAVY (calculated)
-0.358
Length
506 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSQITLFFF FFSILSLSQI SNSSSLLKPH PCPILPLPSS QQLQWQLGSM AMFLHFGPNT FTDSEWGTGK ANPSIFNPTH LNASQWVQIA KDSGFSRVIL
101: TAKHHDGFCL WPSEYTDYSV KSSQWRNGAG DVVAELASAA KEAGIGLGLY LSPWDRHEQC YGKTLEYNEF YLSQMTELLT KYGEIKEVWL DGAKGDGEKD
201: MEYFFDTWFS LIHQLQPKAV IFSDAGPDVR WIGDEAGLAG STCWSLFNRT NAKIGDTEPS YSQEGDGYGQ DWVPAECDVS IRPGWFWHAS ESPKPAVQLL
301: DIYYNSVGRN CLFLLNVPPN SSGLISEQDI KVLEEFSEMK NSIFSNNLAR KAFVNSSSIR GDQSSQFGPK NVLEEGLDKY WAPEENQNEW VLYLEFKDLV
401: SFNVLEIREP IHMGQRIASF HLETRKTGSG EWERVVSGTT VGNKRLLRFL NVVESRSLKL VVDKARTDPL ISYLGLYMDK FSGSSRNTTK ITITRTLKEE
501: QQLHDL
101: TAKHHDGFCL WPSEYTDYSV KSSQWRNGAG DVVAELASAA KEAGIGLGLY LSPWDRHEQC YGKTLEYNEF YLSQMTELLT KYGEIKEVWL DGAKGDGEKD
201: MEYFFDTWFS LIHQLQPKAV IFSDAGPDVR WIGDEAGLAG STCWSLFNRT NAKIGDTEPS YSQEGDGYGQ DWVPAECDVS IRPGWFWHAS ESPKPAVQLL
301: DIYYNSVGRN CLFLLNVPPN SSGLISEQDI KVLEEFSEMK NSIFSNNLAR KAFVNSSSIR GDQSSQFGPK NVLEEGLDKY WAPEENQNEW VLYLEFKDLV
401: SFNVLEIREP IHMGQRIASF HLETRKTGSG EWERVVSGTT VGNKRLLRFL NVVESRSLKL VVDKARTDPL ISYLGLYMDK FSGSSRNTTK ITITRTLKEE
501: QQLHDL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.